BLASTX nr result

ID: Atractylodes22_contig00034802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034802
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                               109   3e-22
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   109   3e-22
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         108   5e-22
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   107   1e-21
emb|CCH50954.1| T1.2 [Malus x robusta]                                 94   1e-17

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/65 (80%), Positives = 59/65 (90%)
 Frame = -1

Query: 299 KNKGDAQSCGNYRGIKLLSHTMKLWERVIEARVRRETIVSENQFGFMSGRSTTEAIHLLR 120
           KNKGD Q+C NYRGIKL+SHTMKLWERVIE R+R+ET VS+NQFGFM GRST EAI+LLR
Sbjct: 626 KNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLR 685

Query: 119 RLMEK 105
           RLME+
Sbjct: 686 RLMER 690


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/65 (80%), Positives = 59/65 (90%)
 Frame = -1

Query: 299 KNKGDAQSCGNYRGIKLLSHTMKLWERVIEARVRRETIVSENQFGFMSGRSTTEAIHLLR 120
           KNKGD Q+C NYRGIKL+SHTMKLWERVIE R+R+ET VS+NQFGFM GRST EAI+LLR
Sbjct: 230 KNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLR 289

Query: 119 RLMEK 105
           RLME+
Sbjct: 290 RLMER 294


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/65 (78%), Positives = 59/65 (90%)
 Frame = -1

Query: 299 KNKGDAQSCGNYRGIKLLSHTMKLWERVIEARVRRETIVSENQFGFMSGRSTTEAIHLLR 120
           KNKGD QSC NYRGIKL++HTMKLWERVIE  +R+ET V+ENQFGFMSGRS TEAI+LLR
Sbjct: 120 KNKGDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLR 179

Query: 119 RLMEK 105
           R+ME+
Sbjct: 180 RMMER 184


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/65 (73%), Positives = 60/65 (92%)
 Frame = -1

Query: 299 KNKGDAQSCGNYRGIKLLSHTMKLWERVIEARVRRETIVSENQFGFMSGRSTTEAIHLLR 120
           KNKGD Q+C NYRGIKL+SHTMKLWERVI+ R+R+ET+V++NQFGFM GRST EAI+LL+
Sbjct: 208 KNKGDIQNCANYRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQ 267

Query: 119 RLMEK 105
           R+ME+
Sbjct: 268 RVMER 272


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/65 (72%), Positives = 55/65 (84%)
 Frame = -1

Query: 299 KNKGDAQSCGNYRGIKLLSHTMKLWERVIEARVRRETIVSENQFGFMSGRSTTEAIHLLR 120
           KNKGD Q+C NYRGIKL+SHTMKL  RVIE R+R++T VS+NQF FM G ST EAI+LLR
Sbjct: 249 KNKGDIQNCMNYRGIKLMSHTMKLLARVIEHRLRQKTRVSDNQFKFMPGCSTMEAIYLLR 308

Query: 119 RLMEK 105
           +LMEK
Sbjct: 309 KLMEK 313


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