BLASTX nr result

ID: Atractylodes22_contig00034792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034792
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   166   2e-39
emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]   166   2e-39
emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]   164   9e-39
ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...   163   1e-38
ref|XP_002450635.1| hypothetical protein SORBIDRAFT_05g008466 [S...   163   1e-38

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/115 (70%), Positives = 94/115 (81%)
 Frame = -2

Query: 345  PYSSPVLLVRKKDGS*RFCEDYRALIAITVRDRFPIPTVDELLDERHGAQVFSKIDLCSG 166
            P+SSPV+LV+KKDGS RFC DYRAL   TV D++PIP +DELLDE HGA VFSK+DL +G
Sbjct: 726  PFSSPVILVKKKDGSWRFCVDYRALNKETVPDKYPIPVIDELLDELHGATVFSKLDLRAG 785

Query: 165  YHQMRVVAEDTHKTAFCPVNGHYEFLVMLFGLTNAPSTFQAAMNDLFRSVLRRFV 1
            YHQ+ V  EDTHKTAF    GHYEFLVM FGLTNAP+TFQ+ MN++FR  LRRFV
Sbjct: 786  YHQILVRPEDTHKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNEVFRPFLRRFV 840


>emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]
          Length = 793

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/115 (68%), Positives = 95/115 (82%)
 Frame = -2

Query: 345 PYSSPVLLVRKKDGS*RFCEDYRALIAITVRDRFPIPTVDELLDERHGAQVFSKIDLCSG 166
           P+SSPVLLV+KKDG+ RFC DYRAL A+T++DRFPIPTVD++LDE HGA  F+K+DL +G
Sbjct: 537 PFSSPVLLVKKKDGTWRFCTDYRALNAVTIKDRFPIPTVDDMLDELHGATYFTKLDLRAG 596

Query: 165 YHQMRVVAEDTHKTAFCPVNGHYEFLVMLFGLTNAPSTFQAAMNDLFRSVLRRFV 1
           YHQ+RV   D  KTAF   NGHYE+LVM FGL+NAPSTFQA MN +FR  LR+FV
Sbjct: 597 YHQVRVHPPDISKTAFRTHNGHYEYLVMPFGLSNAPSTFQAIMNSIFRPYLRKFV 651


>emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
          Length = 1308

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/115 (68%), Positives = 93/115 (80%)
 Frame = -2

Query: 345 PYSSPVLLVRKKDGS*RFCEDYRALIAITVRDRFPIPTVDELLDERHGAQVFSKIDLCSG 166
           P+SSPVLLV+KKDG+ RFC DYRAL A TV+DRFPIPTVD++LDE HGA  F+K+DL +G
Sbjct: 459 PFSSPVLLVKKKDGTWRFCTDYRALNAATVKDRFPIPTVDDMLDELHGAAFFTKLDLKAG 518

Query: 165 YHQMRVVAEDTHKTAFCPVNGHYEFLVMLFGLTNAPSTFQAAMNDLFRSVLRRFV 1
           YHQ+RV   D  KTAF   NGHYE+LVM FGL NAPSTFQA MN +FR  LR+F+
Sbjct: 519 YHQIRVSTPDIPKTAFRTHNGHYEYLVMPFGLCNAPSTFQAIMNSIFRPYLRKFI 573


>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/115 (68%), Positives = 94/115 (81%)
 Frame = -2

Query: 345 PYSSPVLLVRKKDGS*RFCEDYRALIAITVRDRFPIPTVDELLDERHGAQVFSKIDLCSG 166
           P+SSPVLLV+KKDG+ RFC DYRAL A+T++D+FPIPT+DELLDE  GA +FSK+DL  G
Sbjct: 586 PFSSPVLLVKKKDGTYRFCVDYRALNAVTIKDKFPIPTIDELLDELGGATIFSKLDLRVG 645

Query: 165 YHQMRVVAEDTHKTAFCPVNGHYEFLVMLFGLTNAPSTFQAAMNDLFRSVLRRFV 1
           YHQ+RV   D +KTAF    GHYEFLVM FGL+NAPSTFQA MN LF + LR+FV
Sbjct: 646 YHQIRVHNRDVYKTAFRTHEGHYEFLVMPFGLSNAPSTFQATMNQLFAAFLRKFV 700


>ref|XP_002450635.1| hypothetical protein SORBIDRAFT_05g008466 [Sorghum bicolor]
           gi|241936478|gb|EES09623.1| hypothetical protein
           SORBIDRAFT_05g008466 [Sorghum bicolor]
          Length = 1507

 Score =  163 bits (413), Expect = 1e-38
 Identities = 81/115 (70%), Positives = 93/115 (80%)
 Frame = -2

Query: 345 PYSSPVLLVRKKDGS*RFCEDYRALIAITVRDRFPIPTVDELLDERHGAQVFSKIDLCSG 166
           P+SSPVLLV+K DGS RFC DYRAL A+TV+D FPIP VDELLDE HGA+ F+K+DL SG
Sbjct: 625 PFSSPVLLVKKPDGSWRFCVDYRALNALTVKDAFPIPVVDELLDELHGAKFFTKLDLRSG 684

Query: 165 YHQMRVVAEDTHKTAFCPVNGHYEFLVMLFGLTNAPSTFQAAMNDLFRSVLRRFV 1
           YHQ+R+  ED HKTAF   +G YEFLVM FGL NAP+TFQA MND+ R  LRRFV
Sbjct: 685 YHQVRMRPEDVHKTAFRTHDGLYEFLVMAFGLCNAPATFQALMNDVLRPFLRRFV 739


Top