BLASTX nr result

ID: Atractylodes22_contig00034747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034747
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592295.1| Homeodomain protein (HB2) [Medicago truncatu...    69   4e-10
ref|NP_191674.1| homeobox-leucine zipper protein HDG1 [Arabidops...    67   1e-09
emb|CAB45018.1| homeodomain GLABRA2 like 1 protein [Arabidopsis ...    67   1e-09
gb|AAB71455.1| Strong similarity to Phalaenopsis homeobox protei...    66   3e-09
ref|NP_001117231.1| homeobox-leucine zipper protein HDG2 [Arabid...    66   3e-09

>ref|XP_003592295.1| Homeodomain protein (HB2) [Medicago truncatula]
           gi|355481343|gb|AES62546.1| Homeodomain protein (HB2)
           [Medicago truncatula]
          Length = 842

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 7/74 (9%)
 Frame = -3

Query: 206 LISSGFTIMPDCMSKSG-----APITKFGCE--GGSLLTVGFQILVNDLPSSKLTMDSVN 48
           L+ SGF I+PD    SG       + K G    GGSLLTVGFQILVN LP++KLTM+SV+
Sbjct: 674 LLPSGFAIVPDGNDPSGYGMSNGTLQKGGASDGGGSLLTVGFQILVNSLPTAKLTMESVD 733

Query: 47  TVIGLVSRTVQGIK 6
           TV  L+S T+Q IK
Sbjct: 734 TVNNLISCTIQKIK 747


>ref|NP_191674.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
           gi|75335834|sp|Q9M2E8.1|HDG1_ARATH RecName:
           Full=Homeobox-leucine zipper protein HDG1; AltName:
           Full=HD-ZIP protein HDG1; AltName: Full=Homeodomain
           GLABRA 2-like protein 1; AltName: Full=Homeodomain
           transcription factor HDG1; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 1 gi|6850882|emb|CAB71045.1|
           homeobox protein [Arabidopsis thaliana]
           gi|15292865|gb|AAK92803.1| putative homeobox protein
           [Arabidopsis thaliana] gi|20465805|gb|AAM20391.1|
           putative homeobox protein [Arabidopsis thaliana]
           gi|332646640|gb|AEE80161.1| homeobox-leucine zipper
           protein HDG1 [Arabidopsis thaliana]
          Length = 808

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/76 (52%), Positives = 50/76 (65%), Gaps = 9/76 (11%)
 Frame = -3

Query: 206 LISSGFTIMPD-------CMSKSGAPITKFGC--EGGSLLTVGFQILVNDLPSSKLTMDS 54
           L+ SGF I+P+       C ++    I   GC  EGGSLLTV FQILVN LP++KLT++S
Sbjct: 725 LLPSGFAILPNGQAGTQRCAAEERNSIGNGGCMEEGGSLLTVAFQILVNSLPTAKLTVES 784

Query: 53  VNTVIGLVSRTVQGIK 6
           V TV  L+S TVQ IK
Sbjct: 785 VETVNNLISCTVQKIK 800


>emb|CAB45018.1| homeodomain GLABRA2 like 1 protein [Arabidopsis thaliana]
          Length = 808

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/76 (52%), Positives = 50/76 (65%), Gaps = 9/76 (11%)
 Frame = -3

Query: 206 LISSGFTIMPD-------CMSKSGAPITKFGC--EGGSLLTVGFQILVNDLPSSKLTMDS 54
           L+ SGF I+P+       C ++    I   GC  EGGSLLTV FQILVN LP++KLT++S
Sbjct: 725 LLPSGFAILPNGQAGTQRCAAEERNSIGNGGCMEEGGSLLTVAFQILVNSLPTAKLTVES 784

Query: 53  VNTVIGLVSRTVQGIK 6
           V TV  L+S TVQ IK
Sbjct: 785 VETVNNLISCTVQKIK 800


>gb|AAB71455.1| Strong similarity to Phalaenopsis homeobox protein (gb|U34743)
           [Arabidopsis thaliana]
          Length = 749

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/67 (53%), Positives = 49/67 (73%)
 Frame = -3

Query: 206 LISSGFTIMPDCMSKSGAPITKFGCEGGSLLTVGFQILVNDLPSSKLTMDSVNTVIGLVS 27
           L+ SGF I+PD  + SGAP    G +GGSLLTV FQILV+ +P++KL++ SV TV  L++
Sbjct: 679 LLPSGFAILPDGNANSGAP----GGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA 734

Query: 26  RTVQGIK 6
            TV+ IK
Sbjct: 735 CTVERIK 741


>ref|NP_001117231.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
           gi|332189690|gb|AEE27811.1| homeobox-leucine zipper
           protein HDG2 [Arabidopsis thaliana]
          Length = 719

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/67 (53%), Positives = 49/67 (73%)
 Frame = -3

Query: 206 LISSGFTIMPDCMSKSGAPITKFGCEGGSLLTVGFQILVNDLPSSKLTMDSVNTVIGLVS 27
           L+ SGF I+PD  + SGAP    G +GGSLLTV FQILV+ +P++KL++ SV TV  L++
Sbjct: 649 LLPSGFAILPDGNANSGAP----GGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA 704

Query: 26  RTVQGIK 6
            TV+ IK
Sbjct: 705 CTVERIK 711


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