BLASTX nr result

ID: Atractylodes22_contig00034713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034713
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308653.1| predicted protein [Populus trichocarpa] gi|1...   145   3e-33
ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding prote...   144   7e-33
emb|CAN76349.1| hypothetical protein VITISV_028497 [Vitis vinifera]   144   7e-33
ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding prote...   143   2e-32
ref|XP_002515546.1| protein with unknown function [Ricinus commu...   143   2e-32

>ref|XP_002308653.1| predicted protein [Populus trichocarpa] gi|118482028|gb|ABK92945.1|
           unknown [Populus trichocarpa]
           gi|222854629|gb|EEE92176.1| predicted protein [Populus
           trichocarpa]
          Length = 159

 Score =  145 bits (366), Expect = 3e-33
 Identities = 68/109 (62%), Positives = 71/109 (65%)
 Frame = -1

Query: 403 MSRPGDWNCRSCQHLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXGRGSTMNSSLFGF 224
           MSRPGDWNCRSCQHLNFQRRDSCQRC                       G   +   FGF
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDPRPGERDHYGSF---------GGRSSGGSFGF 51

Query: 223 TGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKDDLATGGGGFDCDM 77
           TGPDVRPGDWYC  GNCGAHNFASRSSCFKCG  KD+  + GGG D DM
Sbjct: 52  TGPDVRPGDWYCTAGNCGAHNFASRSSCFKCGVSKDE--SSGGGLDADM 98


>ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|297743402|emb|CBI36269.3| unnamed protein
           product [Vitis vinifera]
          Length = 150

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/109 (64%), Positives = 74/109 (67%)
 Frame = -1

Query: 403 MSRPGDWNCRSCQHLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXGRGSTMNSSLFGF 224
           MSRPGDWNCRSCQH+NFQRRDSCQRC                      RG     S FGF
Sbjct: 1   MSRPGDWNCRSCQHMNFQRRDSCQRCGDPKSGGGDFGSFGG-------RGG----SSFGF 49

Query: 223 TGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKDDLATGGGGFDCDM 77
           TG DVRPGDWYCN GNCGAHNFASRS+CFKCGAFKD+ A   GG+D DM
Sbjct: 50  TGSDVRPGDWYCNAGNCGAHNFASRSNCFKCGAFKDESA---GGYDSDM 95



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/101 (35%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
 Frame = -1

Query: 397 RPGDWNCRS--CQHLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXGRGSTMNSSL-FG 227
           RPGDW C +  C   NF  R +C +C                        S M+ S  FG
Sbjct: 55  RPGDWYCNAGNCGAHNFASRSNCFKCGAFKDESAGGYD------------SDMSRSRGFG 102

Query: 226 FTGPDVRPG----DWYCNVGNCGAHNFASRSSCFKCGAFKD 116
           F G   R G    DW C+   C  HNFASR  CF+C A +D
Sbjct: 103 FGGGSGRSGWKSGDWICSRSGCNEHNFASRMECFRCNAPRD 143


>emb|CAN76349.1| hypothetical protein VITISV_028497 [Vitis vinifera]
          Length = 137

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/109 (64%), Positives = 74/109 (67%)
 Frame = -1

Query: 403 MSRPGDWNCRSCQHLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXGRGSTMNSSLFGF 224
           MSRPGDWNCRSCQH+NFQRRDSCQRC                      RG     S FGF
Sbjct: 1   MSRPGDWNCRSCQHMNFQRRDSCQRCGDPKSGGGDFGSFGG-------RGG----SSFGF 49

Query: 223 TGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKDDLATGGGGFDCDM 77
           TG DVRPGDWYCN GNCGAHNFASRS+CFKCGAFKD+ A   GG+D DM
Sbjct: 50  TGSDVRPGDWYCNAGNCGAHNFASRSNCFKCGAFKDESA---GGYDSDM 95


>ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|296082008|emb|CBI21013.3| unnamed protein
           product [Vitis vinifera]
          Length = 158

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/109 (61%), Positives = 73/109 (66%)
 Frame = -1

Query: 403 MSRPGDWNCRSCQHLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXGRGSTMNSSLFGF 224
           MSRPGDWNCRSCQ+LNFQRRDSCQRC                       G +  SS FGF
Sbjct: 1   MSRPGDWNCRSCQYLNFQRRDSCQRCGEPRPGDRGDYG-----------GFSRGSSSFGF 49

Query: 223 TGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKDDLATGGGGFDCDM 77
           TGPDVRPGDWYC +GNCGAHNFASRSSCFKCG  KD+     GG++ DM
Sbjct: 50  TGPDVRPGDWYCTIGNCGAHNFASRSSCFKCGGLKDE---SSGGYEGDM 95



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/96 (37%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
 Frame = -1

Query: 397 RPGDWNCR--SCQHLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXGRGSTMNSSLFGF 224
           RPGDW C   +C   NF  R SC +C                     G GS   SS  G 
Sbjct: 55  RPGDWYCTIGNCGAHNFASRSSCFKCGGLKDESSGGYEGDMSRPRGFGFGSG-GSSGSGI 113

Query: 223 TGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKD 116
                + GDW CN   C  HNFASR  CF+C A +D
Sbjct: 114 GRSGWKSGDWICNRSGCNEHNFASRMECFRCNAPRD 149


>ref|XP_002515546.1| protein with unknown function [Ricinus communis]
           gi|223545490|gb|EEF46995.1| protein with unknown
           function [Ricinus communis]
          Length = 154

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/109 (65%), Positives = 73/109 (66%)
 Frame = -1

Query: 403 MSRPGDWNCRSCQHLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXGRGSTMNSSLFGF 224
           MSRPGDWNCRSCQHLNFQRRDSCQRC                      RGS    S FGF
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCREPRPGERGDHYSSFGG-----RGS----SSFGF 51

Query: 223 TGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKDDLATGGGGFDCDM 77
           TGPDVRPGDWYC  GNCGAHNFASRSSCFKCGA KD+     GGFD +M
Sbjct: 52  TGPDVRPGDWYCTFGNCGAHNFASRSSCFKCGASKDE---SSGGFDGEM 97



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
 Frame = -1

Query: 397 RPGDWNCR--SCQHLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXGRGSTMNSSLFGF 224
           RPGDW C   +C   NF  R SC +C                     G GS  ++S  G+
Sbjct: 57  RPGDWYCTFGNCGAHNFASRSSCFKCGASKDESSGGFDGEMSRMRGFGFGSG-STSRSGW 115

Query: 223 TGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKD 116
                + GDW C    C  HNFASR+ C++C A +D
Sbjct: 116 -----KSGDWICTRSGCNEHNFASRTECYRCNAPRD 146


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