BLASTX nr result

ID: Atractylodes22_contig00034462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034462
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    82   4e-14
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    70   2e-10
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    64   1e-08
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    61   8e-08

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 37/69 (53%), Positives = 55/69 (79%)
 Frame = -2

Query: 208 QFLALRQKGTINEYRKQFVSLAAPLDDIPEEIFMSQFINGLNPAIRAEVRMLSPTNLNEV 29
           Q+L+  Q  ++ EYR++FV  AAPLD IPEEI M +FI+GLNP +++E+R+L+P NL++ 
Sbjct: 258 QWLSTTQTASVWEYRRKFVETAAPLDGIPEEILMGKFIHGLNPELQSEIRVLNPYNLDQA 317

Query: 28  MDLASKIEE 2
           M+LA K+EE
Sbjct: 318 MELALKLEE 326


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/69 (47%), Positives = 47/69 (68%)
 Frame = -2

Query: 208  QFLALRQKGTINEYRKQFVSLAAPLDDIPEEIFMSQFINGLNPAIRAEVRMLSPTNLNEV 29
            QFLA+RQ+GT+  Y ++F  L  PL  I EE+  S F+NGL P IRAE R+L P  L  +
Sbjct: 854  QFLAVRQQGTVAAYWREFEILETPLKGISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHL 913

Query: 28   MDLASKIEE 2
            M++A ++E+
Sbjct: 914  MEMAQRVED 922


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/69 (46%), Positives = 48/69 (69%)
 Frame = -2

Query: 208 QFLALRQKGTINEYRKQFVSLAAPLDDIPEEIFMSQFINGLNPAIRAEVRMLSPTNLNEV 29
           Q LAL+Q  T+ E+R+QF  +AAPL  + E++  + F+NGL P ++AE+R  SP  L++ 
Sbjct: 189 QLLALKQTTTVKEFRRQFEIIAAPLKGLAEDVLEAAFVNGLRPDMQAELRQWSPFGLDKK 248

Query: 28  MDLASKIEE 2
           M +A KIEE
Sbjct: 249 MQVAQKIEE 257


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/69 (42%), Positives = 49/69 (71%)
 Frame = -2

Query: 208 QFLALRQKGTINEYRKQFVSLAAPLDDIPEEIFMSQFINGLNPAIRAEVRMLSPTNLNEV 29
           Q+L+  Q+  + EYR++F+ L APL+ IPE I  +QF++ L   I+ EVR++ P++L+  
Sbjct: 183 QWLSHEQEEGVVEYRRKFIELLAPLEGIPESIAQAQFVSKLKEEIKNEVRIMGPSSLDHA 242

Query: 28  MDLASKIEE 2
           M+LA ++EE
Sbjct: 243 MELAVQVEE 251


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/69 (40%), Positives = 46/69 (66%)
 Frame = -2

Query: 208 QFLALRQKGTINEYRKQFVSLAAPLDDIPEEIFMSQFINGLNPAIRAEVRMLSPTNLNEV 29
           +FLA++Q+G+++EY ++F  L+APL ++ EE+    F NGL+P IR EV  +    L ++
Sbjct: 152 RFLAIKQEGSVSEYLQKFEELSAPLPEMAEEVLEGTFTNGLDPRIRKEVFAMRVVGLEDL 211

Query: 28  MDLASKIEE 2
           M+ A   EE
Sbjct: 212 MEAAQLAEE 220


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