BLASTX nr result

ID: Atractylodes22_contig00034427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034427
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...   350   2e-94
emb|CBI35070.3| unnamed protein product [Vitis vinifera]              348   2e-93
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...   348   2e-93
ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...   341   1e-91
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...   341   1e-91

>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score =  350 bits (899), Expect = 2e-94
 Identities = 167/193 (86%), Positives = 178/193 (92%)
 Frame = -2

Query: 1029 KAGVSCGKFHYGSAFGEPSGHADKVEDISETLVKHGFCYNGKDFLYSGITGMPLQAYIFM 850
            KAGVSCG+FHYGSAFGEPSGHADKV+ ISETL+K GF YNGKDFLYSGITG PLQAYIFM
Sbjct: 966  KAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFM 1025

Query: 849  GPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERDCLIAYGTSNLI 670
            GPIYYQKLKHMVLDKMHARG GPR ++TRQPTEGR+RNGGLRVGEMERDCLIAYG S LI
Sbjct: 1026 GPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI 1085

Query: 669  YERLMISSDPFEVQVCRKCGLLGYINYQTKTRICSTCKNGDNISAMKLPYACKLLFQELQ 490
            YERLMISSDPFEVQVCR CGLLGY N++ KT ICS+CKNGDNIS MKLPYACKLL QELQ
Sbjct: 1086 YERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQ 1145

Query: 489  SMNIVPRLTLADS 451
            SMNIVPRL LA++
Sbjct: 1146 SMNIVPRLKLAEA 1158


>emb|CBI35070.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  348 bits (892), Expect = 2e-93
 Identities = 163/193 (84%), Positives = 178/193 (92%)
 Frame = -2

Query: 1029 KAGVSCGKFHYGSAFGEPSGHADKVEDISETLVKHGFCYNGKDFLYSGITGMPLQAYIFM 850
            KAGVSCG+FHYGSAFGEPSGHADKVE IS+TLVKHGF Y+GKDF+YSGITG PLQAYIFM
Sbjct: 269  KAGVSCGRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFM 328

Query: 849  GPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERDCLIAYGTSNLI 670
            GPIYYQKLKHMVLDKMHARG GPR ++TRQPTEGR+RNGGLRVGEMERDCLIAYG S LI
Sbjct: 329  GPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI 388

Query: 669  YERLMISSDPFEVQVCRKCGLLGYINYQTKTRICSTCKNGDNISAMKLPYACKLLFQELQ 490
            +ERLM+SSDPFEVQVCR CGLLGY N++ K  ICSTCKNGDNIS MKLPYACKLLFQELQ
Sbjct: 389  FERLMVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQ 448

Query: 489  SMNIVPRLTLADS 451
            +MN+VPRL L ++
Sbjct: 449  AMNVVPRLKLTEA 461


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score =  348 bits (892), Expect = 2e-93
 Identities = 163/193 (84%), Positives = 178/193 (92%)
 Frame = -2

Query: 1029 KAGVSCGKFHYGSAFGEPSGHADKVEDISETLVKHGFCYNGKDFLYSGITGMPLQAYIFM 850
            KAGVSCG+FHYGSAFGEPSGHADKVE IS+TLVKHGF Y+GKDF+YSGITG PLQAYIFM
Sbjct: 950  KAGVSCGRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFM 1009

Query: 849  GPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERDCLIAYGTSNLI 670
            GPIYYQKLKHMVLDKMHARG GPR ++TRQPTEGR+RNGGLRVGEMERDCLIAYG S LI
Sbjct: 1010 GPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI 1069

Query: 669  YERLMISSDPFEVQVCRKCGLLGYINYQTKTRICSTCKNGDNISAMKLPYACKLLFQELQ 490
            +ERLM+SSDPFEVQVCR CGLLGY N++ K  ICSTCKNGDNIS MKLPYACKLLFQELQ
Sbjct: 1070 FERLMVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQ 1129

Query: 489  SMNIVPRLTLADS 451
            +MN+VPRL L ++
Sbjct: 1130 AMNVVPRLKLTEA 1142


>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1152

 Score =  341 bits (875), Expect = 1e-91
 Identities = 163/193 (84%), Positives = 175/193 (90%)
 Frame = -2

Query: 1029 KAGVSCGKFHYGSAFGEPSGHADKVEDISETLVKHGFCYNGKDFLYSGITGMPLQAYIFM 850
            KAGVSCG+FHYGSAFGE SGHADKVE ISETLV  GF Y+GKDF+YSGITG PLQAYIFM
Sbjct: 960  KAGVSCGRFHYGSAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFM 1019

Query: 849  GPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERDCLIAYGTSNLI 670
            GPIYYQKLKHMVLDKMHARG GPR ++TRQPTEGR+RNGGLRVGEMERDCLIAYG S LI
Sbjct: 1020 GPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI 1079

Query: 669  YERLMISSDPFEVQVCRKCGLLGYINYQTKTRICSTCKNGDNISAMKLPYACKLLFQELQ 490
            YERLM+SSDPFEVQVC  CGLLGY N++ KT ICS+CKNGDNIS MKLPYACKL+ QELQ
Sbjct: 1080 YERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQ 1139

Query: 489  SMNIVPRLTLADS 451
            SMNIVPRL LAD+
Sbjct: 1140 SMNIVPRLKLADA 1152


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1166

 Score =  341 bits (875), Expect = 1e-91
 Identities = 163/193 (84%), Positives = 175/193 (90%)
 Frame = -2

Query: 1029 KAGVSCGKFHYGSAFGEPSGHADKVEDISETLVKHGFCYNGKDFLYSGITGMPLQAYIFM 850
            KAGVSCG+FHYGSAFGE SGHADKVE ISETLV  GF Y+GKDF+YSGITG PLQAYIFM
Sbjct: 974  KAGVSCGRFHYGSAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFM 1033

Query: 849  GPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERDCLIAYGTSNLI 670
            GPIYYQKLKHMVLDKMHARG GPR ++TRQPTEGR+RNGGLRVGEMERDCLIAYG S LI
Sbjct: 1034 GPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI 1093

Query: 669  YERLMISSDPFEVQVCRKCGLLGYINYQTKTRICSTCKNGDNISAMKLPYACKLLFQELQ 490
            YERLM+SSDPFEVQVC  CGLLGY N++ KT ICS+CKNGDNIS MKLPYACKL+ QELQ
Sbjct: 1094 YERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQ 1153

Query: 489  SMNIVPRLTLADS 451
            SMNIVPRL LAD+
Sbjct: 1154 SMNIVPRLKLADA 1166


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