BLASTX nr result

ID: Atractylodes22_contig00034393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034393
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG56413.1| MDR-like ABC transporter [Catharanthus roseus]         184   5e-45
ref|XP_003518599.1| PREDICTED: ABC transporter B family member 4...   181   5e-44
ref|XP_002882100.1| P-glycoprotein 4, P-glycoprotein4 [Arabidops...   180   1e-43
ref|NP_182223.1| ABC transporter B family member 4 [Arabidopsis ...   180   1e-43
dbj|BAM11098.1| ABC protein [Coptis japonica]                         179   2e-43

>gb|ABG56413.1| MDR-like ABC transporter [Catharanthus roseus]
          Length = 1266

 Score =  184 bits (468), Expect = 5e-45
 Identities = 93/116 (80%), Positives = 107/116 (92%)
 Frame = -1

Query: 428  GYDTIVGGRGEQLSGGQRQRIAIARAILKDPKVLLLDEATSALDAESEHIVQDALDKVMI 249
            GYDT VG RG QLSGGQ+QRIAIARAILKDP++LLLDEATSALDAESE IVQDALDKVM+
Sbjct: 1151 GYDTSVGERGVQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQDALDKVMV 1210

Query: 248  GRTSIVVAHRLSTIEGADIIAVVKNGVIAEKGRHDELVNISGGVYASLVALQTTCA 81
             RT++VVAHRLSTI+GAD+IAVVKNGVI+EKGRHDEL+ +  GVYASLV+LQ++ A
Sbjct: 1211 NRTTVVVAHRLSTIKGADVIAVVKNGVISEKGRHDELMKMENGVYASLVSLQSSAA 1266



 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/112 (66%), Positives = 90/112 (80%)
 Frame = -1

Query: 428 GYDTIVGGRGEQLSGGQRQRIAIARAILKDPKVLLLDEATSALDAESEHIVQDALDKVMI 249
           G DT+VG  G QLSGGQ+QRIAIARAILK+P++LLLDEATSALDAESE IVQDALD VM 
Sbjct: 489 GLDTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQDALDNVMS 548

Query: 248 GRTSIVVAHRLSTIEGADIIAVVKNGVIAEKGRHDELVNISGGVYASLVALQ 93
            RT++VVAHRLSTI  A +IAVV++G + E+G H EL+    G Y+ L+ +Q
Sbjct: 549 NRTTVVVAHRLSTIRNAHLIAVVQSGKLVEQGTHAELIKDPNGAYSQLIRMQ 600


>ref|XP_003518599.1| PREDICTED: ABC transporter B family member 4-like [Glycine max]
          Length = 1282

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/116 (75%), Positives = 105/116 (90%)
 Frame = -1

Query: 428  GYDTIVGGRGEQLSGGQRQRIAIARAILKDPKVLLLDEATSALDAESEHIVQDALDKVMI 249
            GYDTIVG RG QLSGGQ+QR+AIARAI+K PK+LLLDEATSALDAESE +VQDALDKVM+
Sbjct: 1165 GYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMV 1224

Query: 248  GRTSIVVAHRLSTIEGADIIAVVKNGVIAEKGRHDELVNISGGVYASLVALQTTCA 81
             RT++VVAHRLSTI+ AD+IAVVKNGVI EKG+H++L+N+SGG YASLV L T+ +
Sbjct: 1225 NRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHEKLINVSGGFYASLVQLHTSAS 1280



 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/112 (65%), Positives = 91/112 (81%)
 Frame = -1

Query: 428 GYDTIVGGRGEQLSGGQRQRIAIARAILKDPKVLLLDEATSALDAESEHIVQDALDKVMI 249
           G DT+VG  G QLSGGQ+QRIAIARAILK+P++LLLDEATSALDAESE IVQ+ALD++M+
Sbjct: 509 GLDTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALDRIMV 568

Query: 248 GRTSIVVAHRLSTIEGADIIAVVKNGVIAEKGRHDELVNISGGVYASLVALQ 93
            RT+I+VAHRLST+  AD+IAV+  G + EKG H EL+    G Y+ L+ LQ
Sbjct: 569 NRTTIIVAHRLSTVRNADVIAVIHRGKMVEKGTHIELLKDPEGAYSQLIRLQ 620


>ref|XP_002882100.1| P-glycoprotein 4, P-glycoprotein4 [Arabidopsis lyrata subsp. lyrata]
            gi|297327939|gb|EFH58359.1| P-glycoprotein 4,
            P-glycoprotein4 [Arabidopsis lyrata subsp. lyrata]
          Length = 1286

 Score =  180 bits (456), Expect = 1e-43
 Identities = 91/116 (78%), Positives = 103/116 (88%)
 Frame = -1

Query: 428  GYDTIVGGRGEQLSGGQRQRIAIARAILKDPKVLLLDEATSALDAESEHIVQDALDKVMI 249
            GYDT+VG RG QLSGGQ+QR+AIARAI+KDPKVLLLDEATSALDAESE +VQDALD+VM+
Sbjct: 1170 GYDTMVGERGIQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQDALDRVMV 1229

Query: 248  GRTSIVVAHRLSTIEGADIIAVVKNGVIAEKGRHDELVNISGGVYASLVALQTTCA 81
             RT+IVVAHRLSTI+ AD+IAVVKNGVI EKG+HD L+NI  GVYASLV L  T A
Sbjct: 1230 NRTTIVVAHRLSTIKNADVIAVVKNGVIVEKGKHDTLINIKDGVYASLVQLHLTAA 1285



 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/112 (65%), Positives = 91/112 (81%)
 Frame = -1

Query: 428 GYDTIVGGRGEQLSGGQRQRIAIARAILKDPKVLLLDEATSALDAESEHIVQDALDKVMI 249
           G DT+VG  G QLSGGQ+QRIA+ARAILKDP++LLLDEATSALDAESE +VQ+ALD++M+
Sbjct: 512 GLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERVVQEALDRIMV 571

Query: 248 GRTSIVVAHRLSTIEGADIIAVVKNGVIAEKGRHDELVNISGGVYASLVALQ 93
            RT++VVAHRLST+  AD+IAV+  G I EKG H EL+    G Y+ L+ LQ
Sbjct: 572 NRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSHTELLKDPEGAYSQLIRLQ 623


>ref|NP_182223.1| ABC transporter B family member 4 [Arabidopsis thaliana]
            gi|75318687|sp|O80725.1|AB4B_ARATH RecName: Full=ABC
            transporter B family member 4; Short=ABC transporter
            ABCB.4; Short=AtABCB4; AltName: Full=Multidrug resistance
            protein 4; AltName: Full=P-glycoprotein 4
            gi|3522943|gb|AAC34225.1| putative ABC transporter
            [Arabidopsis thaliana] gi|330255691|gb|AEC10785.1| ABC
            transporter B family member 4 [Arabidopsis thaliana]
          Length = 1286

 Score =  180 bits (456), Expect = 1e-43
 Identities = 91/116 (78%), Positives = 103/116 (88%)
 Frame = -1

Query: 428  GYDTIVGGRGEQLSGGQRQRIAIARAILKDPKVLLLDEATSALDAESEHIVQDALDKVMI 249
            GYDT+VG RG QLSGGQ+QR+AIARAI+KDPKVLLLDEATSALDAESE +VQDALD+VM+
Sbjct: 1170 GYDTMVGERGIQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQDALDRVMV 1229

Query: 248  GRTSIVVAHRLSTIEGADIIAVVKNGVIAEKGRHDELVNISGGVYASLVALQTTCA 81
             RT+IVVAHRLSTI+ AD+IAVVKNGVI EKG+HD L+NI  GVYASLV L  T A
Sbjct: 1230 NRTTIVVAHRLSTIKNADVIAVVKNGVIVEKGKHDTLINIKDGVYASLVQLHLTAA 1285



 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/112 (65%), Positives = 91/112 (81%)
 Frame = -1

Query: 428 GYDTIVGGRGEQLSGGQRQRIAIARAILKDPKVLLLDEATSALDAESEHIVQDALDKVMI 249
           G DT+VG  G QLSGGQ+QRIA+ARAILKDP++LLLDEATSALDAESE +VQ+ALD++M+
Sbjct: 511 GLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERVVQEALDRIMV 570

Query: 248 GRTSIVVAHRLSTIEGADIIAVVKNGVIAEKGRHDELVNISGGVYASLVALQ 93
            RT++VVAHRLST+  AD+IAV+  G I EKG H EL+    G Y+ L+ LQ
Sbjct: 571 NRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSHTELLKDPEGAYSQLIRLQ 622


>dbj|BAM11098.1| ABC protein [Coptis japonica]
          Length = 1292

 Score =  179 bits (454), Expect = 2e-43
 Identities = 90/116 (77%), Positives = 104/116 (89%)
 Frame = -1

Query: 428  GYDTIVGGRGEQLSGGQRQRIAIARAILKDPKVLLLDEATSALDAESEHIVQDALDKVMI 249
            GYDT+VG RG QLSGGQ+QR+AIARA++K PK+LLLDEATSALDAESE +VQDALDKVM+
Sbjct: 1177 GYDTMVGERGVQLSGGQKQRVAIARAMVKAPKILLLDEATSALDAESERVVQDALDKVMV 1236

Query: 248  GRTSIVVAHRLSTIEGADIIAVVKNGVIAEKGRHDELVNISGGVYASLVALQTTCA 81
             RT+IVVAHRLSTI+ AD+IAVVKNGVI EKG+HD L+NIS GVYASLVAL  T +
Sbjct: 1237 NRTTIVVAHRLSTIKNADLIAVVKNGVIVEKGKHDHLINISDGVYASLVALHMTAS 1292



 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/112 (68%), Positives = 91/112 (81%)
 Frame = -1

Query: 428 GYDTIVGGRGEQLSGGQRQRIAIARAILKDPKVLLLDEATSALDAESEHIVQDALDKVMI 249
           G DT+VG  G  LSGGQ+QR+AIARAILKDP++LLLDEATSALDAESEHIVQ+ALD+VM+
Sbjct: 524 GLDTLVGEHGTHLSGGQKQRVAIARAILKDPRILLLDEATSALDAESEHIVQEALDRVMV 583

Query: 248 GRTSIVVAHRLSTIEGADIIAVVKNGVIAEKGRHDELVNISGGVYASLVALQ 93
            RT++VVAHRLSTI  AD+IAVV  G I EKG H EL+    G Y+ L+ LQ
Sbjct: 584 NRTTVVVAHRLSTIRSADMIAVVHRGKIVEKGSHSELLKDPDGAYSQLIRLQ 635


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