BLASTX nr result

ID: Atractylodes22_contig00034388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034388
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin...    89   4e-16
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu...    84   1e-14
ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [...    80   2e-13
ref|XP_003545603.1| PREDICTED: zinc finger CCCH domain-containin...    80   2e-13
ref|XP_003519444.1| PREDICTED: zinc finger CCCH domain-containin...    79   5e-13

>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
           vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
           product [Vitis vinifera]
          Length = 450

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 39/56 (69%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = -3

Query: 168 IEEAIRRLRIQPDGKENETG-STAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHPTY 4
           +EEAI RL+I  + +E   G S+ YPDRPGEPDCIYYLRTGLCGYG  CRFNHP Y
Sbjct: 20  VEEAILRLKIHDNQEEGSVGHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPAY 75


>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
           gi|223531614|gb|EEF33442.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 456

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/56 (66%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = -3

Query: 168 IEEAIRRLRIQPDGKENETG-STAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHPTY 4
           IEEAI RL+I  + ++     S+ YPDRPGEPDC+YYLRTGLCGYG+ CRFNHP Y
Sbjct: 27  IEEAIWRLKIHDNQEQGGMAPSSPYPDRPGEPDCVYYLRTGLCGYGNNCRFNHPPY 82


>ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355518206|gb|AES99829.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 422

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = -3

Query: 168 IEEAIRRLRIQPD-GKENETGSTAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHP 10
           IEEAIRRL+I     ++    S  YPDRPGEPDC+YYLRTG+CGYG  CR+NHP
Sbjct: 20  IEEAIRRLKINSTRDRDAVPQSMPYPDRPGEPDCVYYLRTGMCGYGSNCRYNHP 73


>ref|XP_003545603.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           [Glycine max]
          Length = 417

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = -3

Query: 168 IEEAIRRLRIQPD-GKENETGSTAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHPTY 4
           IEEAIRRL+I  +  ++    ST YPDRPGEP+C+YYLRTG CGYG  CR++HP +
Sbjct: 17  IEEAIRRLKINDNWDRDAAAQSTQYPDRPGEPECLYYLRTGACGYGSNCRYHHPAH 72


>ref|XP_003519444.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           isoform 1 [Glycine max] gi|356501263|ref|XP_003519445.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           3-like isoform 2 [Glycine max]
          Length = 415

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = -3

Query: 168 IEEAIRRLRIQPD-GKENETGSTAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHPTY 4
           IEEAIR L+I  +  ++    ST YPDRPGEP+C+YYLRTG+CGYG  CR++HP +
Sbjct: 17  IEEAIRHLKINDNWDRDAAAQSTQYPDRPGEPECLYYLRTGMCGYGTNCRYHHPAH 72


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