BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034283
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    73   3e-11
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...    73   3e-11
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        72   6e-11
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    69   3e-10
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    69   5e-10

>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
 Frame = +2

Query: 17  FKSFL-GANGEGCSLNQSAISFPNTLSRECAEDMI----RHVSNEEVKEAIFSIGSNKAP 181
           F+S L G  GE  SL QS ++    LS  C+ D I    R  S+ +++EA FS+  NKA 
Sbjct: 410 FESLLCGVEGEN-SLAQSDMNL--LLSFRCSVDQINDLERSFSDLDIQEAFFSLPRNKAS 466

Query: 182 GSDRFSSKNFKAA*SIVGEDVTDAIKEFFQHDSLFTQWNHTLVSLVPK 325
           G D +SS+ FK    +VG +VT+A++EFF+   L  QWN T + L+PK
Sbjct: 467 GPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPK 514


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
 Frame = +2

Query: 17  FKSFL-GANGEGCSLNQSAISFPNTLSRECAEDMI----RHVSNEEVKEAIFSIGSNKAP 181
           F+S L G  GE  SL QS ++    LS  C+ D I    R  S+ +++EA FS+  NKA 
Sbjct: 410 FESLLCGVEGEN-SLAQSDMNL--LLSFRCSVDQINDLERSFSDLDIQEAFFSLPRNKAS 466

Query: 182 GSDRFSSKNFKAA*SIVGEDVTDAIKEFFQHDSLFTQWNHTLVSLVPK 325
           G D +SS+ FK    +VG +VT+A++EFF+   L  QWN T + L+PK
Sbjct: 467 GPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPK 514


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
 Frame = +2

Query: 11  SHFKSFLGANGEGCSLNQSAISFPNTLSRECAEDMIRHV----SNEEVKEAIFSIGSNKA 178
           S+F S LG   +   + Q+ ++    LS  C+   +  +    SNE+++ A+FS+  NK+
Sbjct: 407 SYFGSLLGDEVDPYLMEQNDMNL--LLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKS 464

Query: 179 PGSDRFSSKNFKAA*SIVGEDVTDAIKEFFQHDSLFTQWNHTLVSLVPK 325
            G D F+++ F  + SIVG +VTDAIKEFF    L  QWN T + L+PK
Sbjct: 465 CGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPK 513


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
 Frame = +2

Query: 8   VSHFKSFLGANGEGCSLNQSAISFPNTLSR-ECAED----MIRHVSNEEVKEAIFSIGSN 172
           V  FK   G++     ++   IS  N+L+R +C E+    +   VS  ++K   F++ SN
Sbjct: 404 VDFFKELFGSSSH--LISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSN 461

Query: 173 KAPGSDRFSSKNFKAA*SIVGEDVTDAIKEFFQHDSLFTQWNHTLVSLVPK 325
           K+PG D ++S+ FK   SIVG  +  A++EFF+   L  QWN T V++VPK
Sbjct: 462 KSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPK 512


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
 Frame = +2

Query: 8   VSHFKSFLGANGEGCSLNQSAISFPNTLSRECAE----DMIRHVSNEEVKEAIFSIGSNK 175
           V +F+S LG+  +G  L + A    N LS  C+      +    S+E++K A FS+  NK
Sbjct: 303 VEYFQSNLGSE-QGLPLFEQA-DISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNK 360

Query: 176 APGSDRFSSKNFKAA*SIVGEDVTDAIKEFFQHDSLFTQWNHTLVSLVPK 325
           A G D FS + F A   I+G +VT+AI EFF    L  QWN T + L+PK
Sbjct: 361 ASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPK 410