BLASTX nr result

ID: Atractylodes22_contig00034271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034271
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278501.1| PREDICTED: F-box/kelch-repeat protein At5g15...   194   5e-48
emb|CAN83202.1| hypothetical protein VITISV_035685 [Vitis vinifera]   194   6e-48
ref|XP_002533598.1| ubiquitin-protein ligase, putative [Ricinus ...   190   9e-47
ref|XP_002331281.1| f-box family protein [Populus trichocarpa] g...   189   3e-46
ref|XP_002330962.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46

>ref|XP_002278501.1| PREDICTED: F-box/kelch-repeat protein At5g15710 [Vitis vinifera]
           gi|298204433|emb|CBI16913.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score =  194 bits (494), Expect = 5e-48
 Identities = 90/98 (91%), Positives = 92/98 (93%)
 Frame = -3

Query: 296 EILARVPPFMIFRLRSVCKRWNSILLDNGFLKFHSQVPSHGPCLLTFWKNSQSQTPQCSV 117
           EILARVPPFMIFRLRSVCKRWNSILLD+ FLKFHSQVPSHGPCLLTFWKN  SQTPQCSV
Sbjct: 104 EILARVPPFMIFRLRSVCKRWNSILLDSSFLKFHSQVPSHGPCLLTFWKN--SQTPQCSV 161

Query: 116 FSLPLKQWYRIPFMFLPQWAFWMVGSSGGLVCFSGLDG 3
           FSLPLK WYRIPF FLP WAFW+VGSSGGLVCFSGLDG
Sbjct: 162 FSLPLKTWYRIPFTFLPSWAFWLVGSSGGLVCFSGLDG 199


>emb|CAN83202.1| hypothetical protein VITISV_035685 [Vitis vinifera]
          Length = 437

 Score =  194 bits (493), Expect = 6e-48
 Identities = 90/98 (91%), Positives = 92/98 (93%)
 Frame = -3

Query: 296 EILARVPPFMIFRLRSVCKRWNSILLDNGFLKFHSQVPSHGPCLLTFWKNSQSQTPQCSV 117
           EILARVPPFMIFRLRSVCKRWNSILLD+ FLKFHSQVPSHGPCLLTFWKN  SQTPQCSV
Sbjct: 104 EILARVPPFMIFRLRSVCKRWNSILLDSSFLKFHSQVPSHGPCLLTFWKN--SQTPQCSV 161

Query: 116 FSLPLKQWYRIPFMFLPQWAFWMVGSSGGLVCFSGLDG 3
           FSLPLK WYRIPF FLP WAFW+VGSSGGLVCFSGLDG
Sbjct: 162 FSLPLKTWYRIPFTFLPXWAFWLVGSSGGLVCFSGLDG 199


>ref|XP_002533598.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223526527|gb|EEF28789.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 435

 Score =  190 bits (483), Expect = 9e-47
 Identities = 88/98 (89%), Positives = 91/98 (92%)
 Frame = -3

Query: 296 EILARVPPFMIFRLRSVCKRWNSILLDNGFLKFHSQVPSHGPCLLTFWKNSQSQTPQCSV 117
           EILARVPPF+IFRLRSVCKRWNSIL D+ FLKFHSQVPSHGPCLLTFWKN  S TPQCSV
Sbjct: 102 EILARVPPFLIFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKN--SLTPQCSV 159

Query: 116 FSLPLKQWYRIPFMFLPQWAFWMVGSSGGLVCFSGLDG 3
           FSLPLK WYRIPF FLPQWAFW+VGSSGGLVCFSGLDG
Sbjct: 160 FSLPLKTWYRIPFTFLPQWAFWLVGSSGGLVCFSGLDG 197


>ref|XP_002331281.1| f-box family protein [Populus trichocarpa]
           gi|222873706|gb|EEF10837.1| f-box family protein
           [Populus trichocarpa]
          Length = 452

 Score =  189 bits (479), Expect = 3e-46
 Identities = 87/98 (88%), Positives = 89/98 (90%)
 Frame = -3

Query: 296 EILARVPPFMIFRLRSVCKRWNSILLDNGFLKFHSQVPSHGPCLLTFWKNSQSQTPQCSV 117
           EIL RVPPFMIFRLRSVCKRWNSIL D+ FLKFHSQVPSHGPCLLTFWKN    TPQCSV
Sbjct: 106 EILVRVPPFMIFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKN--PHTPQCSV 163

Query: 116 FSLPLKQWYRIPFMFLPQWAFWMVGSSGGLVCFSGLDG 3
           FSLPLK WYRIPF FLPQWAFW+VGSSGGLVCFSGLDG
Sbjct: 164 FSLPLKAWYRIPFTFLPQWAFWLVGSSGGLVCFSGLDG 201


>ref|XP_002330962.1| predicted protein [Populus trichocarpa] gi|222873156|gb|EEF10287.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  189 bits (479), Expect = 3e-46
 Identities = 88/98 (89%), Positives = 90/98 (91%)
 Frame = -3

Query: 296 EILARVPPFMIFRLRSVCKRWNSILLDNGFLKFHSQVPSHGPCLLTFWKNSQSQTPQCSV 117
           EIL RVPPFMIFRLRSVCKRWNSIL D+ FLKFHSQVPSHGPCLLTFWKN   QTPQCSV
Sbjct: 106 EILLRVPPFMIFRLRSVCKRWNSILQDSCFLKFHSQVPSHGPCLLTFWKN--LQTPQCSV 163

Query: 116 FSLPLKQWYRIPFMFLPQWAFWMVGSSGGLVCFSGLDG 3
           FSLPLK WYRIPF FLPQWAFW+VGSSGGLVCFSGLDG
Sbjct: 164 FSLPLKAWYRIPFTFLPQWAFWLVGSSGGLVCFSGLDG 201


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