BLASTX nr result

ID: Atractylodes22_contig00034195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034195
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139384.1| PREDICTED: uncharacterized protein At2g34160...    60   1e-07
ref|XP_002884455.1| nucleic acid binding protein [Arabidopsis ly...    60   1e-07
ref|XP_002328484.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|NP_187113.1| Alba DNA/RNA-binding protein [Arabidopsis thali...    60   1e-07
ref|XP_003555573.1| PREDICTED: uncharacterized protein At2g34160...    60   2e-07

>ref|XP_004139384.1| PREDICTED: uncharacterized protein At2g34160-like [Cucumis sativus]
           gi|449532210|ref|XP_004173075.1| PREDICTED:
           uncharacterized protein At2g34160-like [Cucumis sativus]
          Length = 143

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/92 (43%), Positives = 50/92 (54%)
 Frame = +3

Query: 120 SSEDVKDFRIHVSNTKKPFIFHLNLAKIYISRYNSVELTPLGMGYNTNTLISFNFTNNHQ 299
           ++E  K  RI VSNTKKP  F++NLAK YI ++N VEL+ LGM   T   I         
Sbjct: 13  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI--------- 63

Query: 300 EYTCNHTNCSEILKGNGLAT*KCMMKCLPNTI 395
                    +EILK NGLAT K   K L +T+
Sbjct: 64  ---------AEILKNNGLATEK---KVLTSTV 83


>ref|XP_002884455.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330295|gb|EFH60714.1| nucleic acid binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 164

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/90 (45%), Positives = 48/90 (53%)
 Frame = +3

Query: 126 EDVKDFRIHVSNTKKPFIFHLNLAKIYISRYNSVELTPLGMGYNTNTLISFNFTNNHQEY 305
           E  K  RI VSNTKKP  F++NLAK YI ++N VEL+ LGM   T   I           
Sbjct: 33  ETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI----------- 81

Query: 306 TCNHTNCSEILKGNGLAT*KCMMKCLPNTI 395
                  SEILK NGLAT K   K L +T+
Sbjct: 82  -------SEILKNNGLATEK---KVLTSTV 101


>ref|XP_002328484.1| predicted protein [Populus trichocarpa] gi|222838199|gb|EEE76564.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/87 (44%), Positives = 48/87 (55%)
 Frame = +3

Query: 135 KDFRIHVSNTKKPFIFHLNLAKIYISRYNSVELTPLGMGYNTNTLISFNFTNNHQEYTCN 314
           K+ RI VSNTKKP  F++NLAK Y+ +YN VEL+ LGM   T   I              
Sbjct: 34  KNNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAITTVVTI-------------- 79

Query: 315 HTNCSEILKGNGLAT*KCMMKCLPNTI 395
               +EILK NGLAT K   K L +T+
Sbjct: 80  ----AEILKNNGLATEK---KVLTSTV 99


>ref|NP_187113.1| Alba DNA/RNA-binding protein [Arabidopsis thaliana]
           gi|6175166|gb|AAF04892.1|AC011437_7 unknown protein
           [Arabidopsis thaliana] gi|38454036|gb|AAR20712.1|
           At3g04620 [Arabidopsis thaliana]
           gi|38604012|gb|AAR24749.1| At3g04620 [Arabidopsis
           thaliana] gi|332640586|gb|AEE74107.1| Alba
           DNA/RNA-binding protein [Arabidopsis thaliana]
          Length = 164

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/90 (45%), Positives = 48/90 (53%)
 Frame = +3

Query: 126 EDVKDFRIHVSNTKKPFIFHLNLAKIYISRYNSVELTPLGMGYNTNTLISFNFTNNHQEY 305
           E  K  RI VSNTKKP  F++NLAK YI ++N VEL+ LGM   T   I           
Sbjct: 33  ETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI----------- 81

Query: 306 TCNHTNCSEILKGNGLAT*KCMMKCLPNTI 395
                  SEILK NGLAT K   K L +T+
Sbjct: 82  -------SEILKNNGLATEK---KVLTSTV 101


>ref|XP_003555573.1| PREDICTED: uncharacterized protein At2g34160-like [Glycine max]
          Length = 132

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/92 (42%), Positives = 51/92 (55%)
 Frame = +3

Query: 120 SSEDVKDFRIHVSNTKKPFIFHLNLAKIYISRYNSVELTPLGMGYNTNTLISFNFTNNHQ 299
           +++  K +RI VSNTKKP  F++NLAK YI +++ VEL+ LGM   T   I         
Sbjct: 12  ANDSHKKYRIQVSNTKKPLFFYVNLAKRYIQQHDEVELSALGMAIATVVTI--------- 62

Query: 300 EYTCNHTNCSEILKGNGLAT*KCMMKCLPNTI 395
                    SEILK NGLAT K   K L +T+
Sbjct: 63  ---------SEILKNNGLATEK---KVLTSTV 82


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