BLASTX nr result

ID: Atractylodes22_contig00034184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034184
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA63753.1| cyclin A-like protein [Nicotiana tabacum]             114   8e-24
ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]                   102   4e-20
sp|P25010.1|CCNAL_DAUCA RecName: Full=G2/mitotic-specific cyclin...    96   3e-18

>emb|CAA63753.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 314

 Score =  114 bits (285), Expect = 8e-24
 Identities = 70/140 (50%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
 Frame = +2

Query: 8   ADQEN-KRVTRMAKKRAMEAIESQLQPAKKNRVVLGELSNNAVVSGNENMGSDLXXXXXX 184
           ADQEN  RVTR+AKKRA EA+   LQ   K RVVLGE+ N   +S    M          
Sbjct: 2   ADQENCVRVTRLAKKRAAEAMVQHLQQPNKKRVVLGEIRN---LSNQIQMFDSEPLKPKC 58

Query: 185 XXXXXXXXXXXXXXXXXXXMIVERTDEKVSD-PQMCEAYVVDIYEYLHNMEIEAKRRPMA 361
                                 E  D K+ D PQMC AYV DIYEYLH MEIE KRRP++
Sbjct: 59  NKQTTKRKVKRSVSVKEREFREEDVDSKLDDDPQMCSAYVSDIYEYLHQMEIEKKRRPLS 118

Query: 362 EYVEKVQKDVTANMRAILVD 421
           +Y+EKVQKDVTANMR +LVD
Sbjct: 119 DYLEKVQKDVTANMRGVLVD 138


>ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|222842883|gb|EEE80430.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  110 bits (274), Expect = 2e-22
 Identities = 66/141 (46%), Positives = 78/141 (55%), Gaps = 3/141 (2%)
 Frame = +2

Query: 8   ADQEN-KRVTRMAKKRAMEAIESQLQPAKKNRVVLGELSN--NAVVSGNENMGSDLXXXX 178
           A+QEN  RVTR AKKRA     ++ QP  K RVVLGEL N  NA+VS NE          
Sbjct: 2   AEQENCTRVTRAAKKRAAALASTEDQPLNKKRVVLGELPNLSNAIVSSNEPQKQKAKAKP 61

Query: 179 XXXXXXXXXXXXXXXXXXXXXMIVERTDEKVSDPQMCEAYVVDIYEYLHNMEIEAKRRPM 358
                                ++ E  D    DPQMC  Y  DIYEYLH ME++ KRRP+
Sbjct: 62  KARKGASTKKEG---------VLKEDVDGNPEDPQMCAPYASDIYEYLHKMEVDPKRRPL 112

Query: 359 AEYVEKVQKDVTANMRAILVD 421
            +Y+EKVQKDV+ NMR ILVD
Sbjct: 113 PDYIEKVQKDVSPNMRGILVD 133


>ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|222835505|gb|EEE73940.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  102 bits (254), Expect = 3e-20
 Identities = 62/141 (43%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
 Frame = +2

Query: 8   ADQEN-KRVTRMAKKRAMEAIESQLQPAKKNRVVLGELSN--NAVVSGNENMGSDLXXXX 178
           +++EN  R+TR AKKRA     ++ +P  K RVVLGEL N  N  VS NE          
Sbjct: 5   SEKENCVRITRAAKKRAAALASAEDRPLNKKRVVLGELPNLSNTTVSVNE---------V 55

Query: 179 XXXXXXXXXXXXXXXXXXXXXMIVERTDEKVSDPQMCEAYVVDIYEYLHNMEIEAKRRPM 358
                                +  E  D K  DPQMC  Y  DIYEYLH ME++ KRRP+
Sbjct: 56  HKQKAKTKSNTSKRTLTKKEGVFKEDVDGKPEDPQMCAPYASDIYEYLHKMEVDPKRRPL 115

Query: 359 AEYVEKVQKDVTANMRAILVD 421
            +Y+EKVQKDV+ NMR ILVD
Sbjct: 116 PDYIEKVQKDVSPNMRGILVD 136


>dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]
          Length = 306

 Score =  102 bits (253), Expect = 4e-20
 Identities = 65/147 (44%), Positives = 84/147 (57%), Gaps = 9/147 (6%)
 Frame = +2

Query: 8   ADQENK-RVTRMAKKRAMEAIE-SQLQPAKKNRVVLGELSNNAVVSGNENMGSDLXXXXX 181
           AD+EN  RVTR+AKKRA+EA+  S+ Q   K RVVLGEL N   +S N +          
Sbjct: 2   ADKENCIRVTRLAKKRAVEAMAASEQQRPSKKRVVLGELKN---LSSNISSIQTYDFSSG 58

Query: 182 XXXXXXXXXXXXXXXXXXXXMIVERTDE-------KVSDPQMCEAYVVDIYEYLHNMEIE 340
                               +  ++ +E       +  DPQMC AYV DIYEYLH ME+E
Sbjct: 59  PQKQQKNKNKRKAKESLGFEVKEKKVEEAGIDVFSQSDDPQMCGAYVSDIYEYLHKMEME 118

Query: 341 AKRRPMAEYVEKVQKDVTANMRAILVD 421
            KRRP+ +Y++KVQKDVTANMR +L+D
Sbjct: 119 TKRRPLPDYLDKVQKDVTANMRGVLID 145


>sp|P25010.1|CCNAL_DAUCA RecName: Full=G2/mitotic-specific cyclin C13-1; AltName:
           Full=A-like cyclin gi|829260|emb|CAA44631.1| mitotic
           cyclin [Daucus carota]
          Length = 341

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 54/115 (46%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
 Frame = +2

Query: 80  QPAKKNRVVLGELSNNA-VVSGNENMGSDLXXXXXXXXXXXXXXXXXXXXXXXXXMIVER 256
           +PA K RVVLGE+SNN+  VSGNE++                              +   
Sbjct: 8   EPASKRRVVLGEISNNSSAVSGNEDL-------LCREFEVPKCVAQKKRKRGVKEDVGVD 60

Query: 257 TDEKVSDPQMCEAYVVDIYEYLHNMEIEAKRRPMAEYVEKVQKDVTANMRAILVD 421
             EK  DPQMC AYV D+YEYL  ME+E KRRPM  Y+E+VQKDVT+NMR +LVD
Sbjct: 61  FGEKFDDPQMCSAYVSDVYEYLKQMEMETKRRPMMNYIEQVQKDVTSNMRGVLVD 115


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