BLASTX nr result
ID: Atractylodes22_contig00034151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00034151
(819 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28908.3| unnamed protein product [Vitis vinifera] 429 e-118
ref|XP_002532772.1| pentatricopeptide repeat-containing protein,... 405 e-111
ref|XP_002892169.1| pentatricopeptide repeat-containing protein ... 402 e-110
ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|2... 402 e-110
ref|NP_171855.1| pentatricopeptide repeat-containing protein [Ar... 399 e-109
>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 429 bits (1102), Expect = e-118
Identities = 202/271 (74%), Positives = 240/271 (88%)
Frame = +3
Query: 6 NVERDKITYLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEA 185
N+E DKITYLTL+QA YS+ ++DSCL LY EMEE+ LEIPPHAYSLVIGGLC+DG+ +E
Sbjct: 290 NLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEG 349
Query: 186 YTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNV 365
++FENM +KG KANVA+YTAL+DAY K+G++ E I LFER+ EGF+PD+VTYGVIVN
Sbjct: 350 SSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNG 409
Query: 366 LCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRD 545
LCK+GRL+EA+ YFE C++N+VAVNAMFYSSLIDG GKAGR+DEAEK FEEMV GC +D
Sbjct: 410 LCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQD 469
Query: 546 SYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWD 725
SYCYNALIDALAK+GK++EALVLFKRME EGCDQTVYTYTI+++GLF +HRNEEALK+WD
Sbjct: 470 SYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWD 529
Query: 726 LMIDKGITPTAASVRVLATGLCLSGKVSRAC 818
LMIDKGITPT AS R L+ GLCLSGKV+RAC
Sbjct: 530 LMIDKGITPTTASFRALSVGLCLSGKVARAC 560
Score = 108 bits (270), Expect = 1e-21
Identities = 63/238 (26%), Positives = 114/238 (47%)
Frame = +3
Query: 30 YLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYTLFENMI 209
Y L+ AY + + + + L+ M+ + E Y +++ GLC+ G+ EA FE
Sbjct: 368 YTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCK 427
Query: 210 QKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLE 389
N Y++L+D K+G ++E + FE + G D Y +++ L K+G++E
Sbjct: 428 DNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKME 487
Query: 390 EAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALI 569
EA+ F+ + Y+ LI G K R +EA KL++ M++ G + + + AL
Sbjct: 488 EALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALS 547
Query: 570 DALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKG 743
L +GK+ A + + G + ++N L R E+A K+ D ++D+G
Sbjct: 548 VGLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLADGIVDRG 604
Score = 105 bits (263), Expect = 9e-21
Identities = 64/262 (24%), Positives = 118/262 (45%)
Frame = +3
Query: 30 YLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYTLFENMI 209
Y++L+ SD+D ++ E +EK + A + +I G E ++ M
Sbjct: 158 YVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMK 217
Query: 210 QKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLE 389
+ G + ++ + L++ S IE R+FE + PD V+Y ++ CK G +
Sbjct: 218 ESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTK 277
Query: 390 EAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALI 569
+A+ F + + + + Y +LI G D L++EM G + Y+ +I
Sbjct: 278 KAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVI 337
Query: 570 DALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGIT 749
L K+G+ E +F+ M +GC V YT +++ EA+ +++ M +G
Sbjct: 338 GGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFE 397
Query: 750 PTAASVRVLATGLCLSGKVSRA 815
P + V+ GLC SG++ A
Sbjct: 398 PDDVTYGVIVNGLCKSGRLDEA 419
Score = 100 bits (249), Expect = 4e-19
Identities = 65/244 (26%), Positives = 120/244 (49%)
Frame = +3
Query: 12 ERDKITYLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYT 191
E D +TY ++ D ++ + ++ E+ + YS +I GL + G+ EA
Sbjct: 397 EPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEK 456
Query: 192 LFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLC 371
FE M+++G + Y AL+DA AKSG +EE + LF+R+ EG TY ++++ L
Sbjct: 457 FFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLF 516
Query: 372 KTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSY 551
K R EEA++ ++L + + + +L G +G++ A K+ +E+ G ++
Sbjct: 517 KEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPET- 575
Query: 552 CYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLM 731
+ +I+ L K G+ ++A L + G + TI++N L + A+K+
Sbjct: 576 AFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSK 635
Query: 732 IDKG 743
I G
Sbjct: 636 IGIG 639
Score = 66.6 bits (161), Expect = 6e-09
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 6/236 (2%)
Frame = +3
Query: 114 LEIPPHAYSLVIGGLCRDGKPMEAYTLF------ENMIQKGRKANVAMYTALMDAYAKSG 275
+++ P+ + V+ GKP A+ F +N I K + Y +L+D + S
Sbjct: 115 IKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHK-----IECYVSLIDVLSLSS 169
Query: 276 HIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLEEAIRYFELCRENKVAVNAMFYS 455
+ V +F +GF ++ G +EE + + +E+ + + ++
Sbjct: 170 DFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFN 229
Query: 456 SLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALIDALAKNGKIDEALVLFKRMESE 635
L++G + ++ AE++FE M D YN +I K G +A+ F ME
Sbjct: 230 FLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKR 289
Query: 636 GCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPTAASVRVLATGLCLSGK 803
+ TY ++ +++ + L ++ M ++G+ + ++ GLC G+
Sbjct: 290 NLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGR 345
>ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527482|gb|EEF29611.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 647
Score = 405 bits (1040), Expect = e-111
Identities = 195/271 (71%), Positives = 229/271 (84%)
Frame = +3
Query: 6 NVERDKITYLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEA 185
NV DKITY+TL+QA Y++ D+DSCL LY+EM+EK LEIPPH YSLVIGGLC+DGK +E
Sbjct: 279 NVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEG 338
Query: 186 YTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNV 365
YT+FENMI KG KANVA+YTAL+D+ AK G++ E + LF+R+ EG +PDEVTYGVIVN
Sbjct: 339 YTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNS 398
Query: 366 LCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRD 545
LCK+GRL+EA+ Y E C VAVNAMFYSSLIDG GK+GR+DEAE++F EMV GC D
Sbjct: 399 LCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPD 458
Query: 546 SYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWD 725
SYCYNALIDALAK GKIDEAL L KRME +GCDQTVYTYTI++ GLF +HRNEEAL +WD
Sbjct: 459 SYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWD 518
Query: 726 LMIDKGITPTAASVRVLATGLCLSGKVSRAC 818
LMIDKGITPTAA+ R L+TGLCLSGKV+RAC
Sbjct: 519 LMIDKGITPTAAAFRALSTGLCLSGKVARAC 549
Score = 114 bits (285), Expect = 3e-23
Identities = 70/260 (26%), Positives = 121/260 (46%)
Frame = +3
Query: 36 TLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYTLFENMIQK 215
+L++++ + + L ++ M+E +E +Y+ ++ GL A +FE M
Sbjct: 184 SLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENG 243
Query: 216 GRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLEEA 395
+V Y ++ Y + G + + + PD++TY ++ G +
Sbjct: 244 KIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSC 303
Query: 396 IRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALIDA 575
+ + E + + YS +I G K G+ E +FE M++ GC + Y ALID+
Sbjct: 304 LGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDS 363
Query: 576 LAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPT 755
AK G + EA++LFKRM+ EG + TY +I+N L R +EAL+ + KG+
Sbjct: 364 NAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVN 423
Query: 756 AASVRVLATGLCLSGKVSRA 815
A L GL SG+V A
Sbjct: 424 AMFYSSLIDGLGKSGRVDEA 443
Score = 74.3 bits (181), Expect = 3e-11
Identities = 49/175 (28%), Positives = 78/175 (44%)
Frame = +3
Query: 18 DKITYLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYTLF 197
D Y L+ A D L L ME + + Y+++I GL R+ + EA TL+
Sbjct: 458 DSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLW 517
Query: 198 ENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKT 377
+ MI KG A + AL SG + ++ + + G P E + ++N+LCK
Sbjct: 518 DLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIP-ETAFDDMINILCKA 576
Query: 378 GRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSR 542
GR++EA + + + + + LI+ KAG D A KL + G R
Sbjct: 577 GRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRSKIGIGYDR 631
Score = 72.8 bits (177), Expect = 9e-11
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Frame = +3
Query: 393 AIRYFELC-RENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALI 569
AIR+F ++ K N Y SLID G LD + +F + G Y N+LI
Sbjct: 127 AIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLI 186
Query: 570 DALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGIT 749
+ G ++E L +++RM+ G + ++++Y ++NGL N E A +V+++M + I
Sbjct: 187 KSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIG 246
Query: 750 PTAASVRVLATGLCLSGKVSRA 815
P + + G C GK +A
Sbjct: 247 PDVVTYNTMIKGYCEVGKTRKA 268
Score = 70.5 bits (171), Expect = 4e-10
Identities = 46/198 (23%), Positives = 85/198 (42%)
Frame = +3
Query: 210 QKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLE 389
QK N+ Y +L+D A +G ++ V +F + G + ++ G +E
Sbjct: 137 QKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVE 196
Query: 390 EAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALI 569
E + + +EN + + Y+ L++G + ++ AE++FE M N D YN +I
Sbjct: 197 EVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMI 256
Query: 570 DALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGIT 749
+ GK +A K ME TY ++ + + + L ++ M +KG+
Sbjct: 257 KGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLE 316
Query: 750 PTAASVRVLATGLCLSGK 803
++ GLC GK
Sbjct: 317 IPPHVYSLVIGGLCKDGK 334
>ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338011|gb|EFH68428.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 662
Score = 402 bits (1032), Expect = e-110
Identities = 187/271 (69%), Positives = 230/271 (84%), Gaps = 1/271 (0%)
Frame = +3
Query: 9 VERDKITYLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAY 188
+E DKITY+T++QA Y+DSD+ SC+ LY EM+EK L++PPHA+SLVIGGLC++GK E Y
Sbjct: 288 LEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 189 TLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVL 368
+FENMI+KG K NVA+YT L+D YAK+G +E+ IRL R+ EGF PD VTY V+VN L
Sbjct: 348 AVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGL 407
Query: 369 CKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDS 548
CK GR+EEA+ YF+ CR N +A+N+MFYSSLIDG GKAGR+DEAE+LFEEM GC+RDS
Sbjct: 408 CKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDS 467
Query: 549 YCYNALIDALAKNGKIDEALVLFKRM-ESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWD 725
YCYNALIDA K+GK+DEAL LFKRM E EGCDQTVYTYTI+++G+F +HRNEEALK+WD
Sbjct: 468 YCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWD 527
Query: 726 LMIDKGITPTAASVRVLATGLCLSGKVSRAC 818
+MIDKGITPTAA +R L+TGLCLSGKV+RAC
Sbjct: 528 MMIDKGITPTAACLRALSTGLCLSGKVARAC 558
Score = 107 bits (268), Expect = 2e-21
Identities = 65/260 (25%), Positives = 122/260 (46%)
Frame = +3
Query: 36 TLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYTLFENMIQK 215
+L++++ + L ++ +M+E +E + Y+ ++ GL A +FE M
Sbjct: 192 SLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESG 251
Query: 216 GRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLEEA 395
K +V Y ++ Y K+G ++ + + ++G + D++TY ++
Sbjct: 252 RIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSC 311
Query: 396 IRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALIDA 575
+ ++ E + V +S +I G K G+L+E +FE M+ G + Y LID
Sbjct: 312 VALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 371
Query: 576 LAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPT 755
AK G +++A+ L RM EG + V TY++++NGL R EEA+ + G+
Sbjct: 372 YAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAIN 431
Query: 756 AASVRVLATGLCLSGKVSRA 815
+ L GL +G+V A
Sbjct: 432 SMFYSSLIDGLGKAGRVDEA 451
Score = 104 bits (260), Expect = 2e-20
Identities = 61/262 (23%), Positives = 119/262 (45%)
Frame = +3
Query: 30 YLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYTLFENMI 209
Y++L+ D D + +E+ + E + + +I + G E ++ M
Sbjct: 155 YVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMK 214
Query: 210 QKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLE 389
+ G + + Y LM+ + ++ R+FE + S KPD VTY ++ CK G+ +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQ 274
Query: 390 EAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALI 569
+A+ + + + + Y ++I L++EM G + ++ +I
Sbjct: 275 KALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVI 334
Query: 570 DALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGIT 749
L K GK++E +F+ M +G V YT++++G E+A+++ MID+G
Sbjct: 335 GGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFN 394
Query: 750 PTAASVRVLATGLCLSGKVSRA 815
P + V+ GLC +G+V A
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEA 416
Score = 73.9 bits (180), Expect = 4e-11
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Frame = +3
Query: 15 RDKITYLTLLQAYYSDSDYDSCLKLYNEMEEKE-LEIPPHAYSLVIGGLCRDGKPMEAYT 191
RD Y L+ A+ D L L+ MEE+E + + Y+++I G+ ++ + EA
Sbjct: 465 RDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALK 524
Query: 192 LFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLC 371
L++ MI KG A AL SG + ++ + L G D +I N LC
Sbjct: 525 LWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLC 583
Query: 372 KTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSR 542
K GR++EA + + E V + +I+ K G+ D A KL + G R
Sbjct: 584 KAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYER 640
>ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|222870459|gb|EEF07590.1|
predicted protein [Populus trichocarpa]
Length = 599
Score = 402 bits (1032), Expect = e-110
Identities = 192/271 (70%), Positives = 226/271 (83%)
Frame = +3
Query: 6 NVERDKITYLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEA 185
NV DKITY+TL+QA Y++ D+D CL LY+EM+E LEIPPHAYSLVIGGLC++GK +E
Sbjct: 232 NVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEG 291
Query: 186 YTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNV 365
Y +FE MIQKG K NVA+YTAL+D+ AK G++ E + LFER+ EG +PD VTYGV+VN
Sbjct: 292 YAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNC 351
Query: 366 LCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRD 545
+CK+GRL+EA+ Y E CR N VAVNAM YSSLIDG GKAGR+ EAEKLFEEMV GC D
Sbjct: 352 MCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPD 411
Query: 546 SYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWD 725
SYCYNALIDALAK GK DEAL FKRME EGCDQTVYTYTI++NGLF +H+NEEALK+WD
Sbjct: 412 SYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWD 471
Query: 726 LMIDKGITPTAASVRVLATGLCLSGKVSRAC 818
+MIDKGITPTAA+ R L+ GLCLSGKV+RAC
Sbjct: 472 MMIDKGITPTAAAFRALSIGLCLSGKVARAC 502
Score = 100 bits (250), Expect = 3e-19
Identities = 59/238 (24%), Positives = 114/238 (47%)
Frame = +3
Query: 30 YLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYTLFENMI 209
Y L+ + + + L+ M+++ LE Y +V+ +C+ G+ EA E
Sbjct: 310 YTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCR 369
Query: 210 QKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLE 389
G N +Y++L+D K+G + E +LFE + +G PD Y +++ L K G+ +
Sbjct: 370 VNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTD 429
Query: 390 EAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALI 569
EA+ +F+ + Y+ +I+G + + +EA K+++ M++ G + + + AL
Sbjct: 430 EALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALS 489
Query: 570 DALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKG 743
L +GK+ A L + G + ++N L R +EA K+ D +D+G
Sbjct: 490 IGLCLSGKVARACKLLDELAPMGVIPET-AFEDMLNVLCKAGRIKEACKLADGFVDRG 546
Score = 94.4 bits (233), Expect = 3e-17
Identities = 64/245 (26%), Positives = 115/245 (46%)
Frame = +3
Query: 9 VERDKITYLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAY 188
+E D +TY ++ D ++ + + YS +I GL + G+ EA
Sbjct: 338 LEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAE 397
Query: 189 TLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVL 368
LFE M++KG + Y AL+DA AK G +E + F+R+ EG TY +++N L
Sbjct: 398 KLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGL 457
Query: 369 CKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDS 548
+ + EEA++ +++ + + A + +L G +G++ A KL +E+ G ++
Sbjct: 458 FREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPET 517
Query: 549 YCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDL 728
+ +++ L K G+I EA L G + T+++N L + ALK+
Sbjct: 518 -AFEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHS 576
Query: 729 MIDKG 743
I G
Sbjct: 577 KIGIG 581
Score = 84.0 bits (206), Expect = 4e-14
Identities = 48/196 (24%), Positives = 91/196 (46%)
Frame = +3
Query: 228 NVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLEEAIRYF 407
NV+ +L+ ++ G +EE++ ++ + G +P TY ++N L + +E A R
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190
Query: 408 ELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALIDALAKN 587
E+ K+ + + Y+++I G+ + G+ +A + F +M + D Y LI A
Sbjct: 191 EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAE 250
Query: 588 GKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPTAASV 767
G D L L+ M+ G + + Y++++ GL + + E V++ MI KG A
Sbjct: 251 GDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIY 310
Query: 768 RVLATGLCLSGKVSRA 815
L G + A
Sbjct: 311 TALIDSNAKCGNMGEA 326
Score = 62.4 bits (150), Expect = 1e-07
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Frame = +3
Query: 381 RLEEAIRYFELC-RENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCY 557
R + A+++F ++ K N Y S ID G LD + +F + G +
Sbjct: 76 RPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAA 135
Query: 558 NALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMID 737
N+LI + G ++E L +++ M+ G + +++TY ++NGL N E A +V ++M +
Sbjct: 136 NSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMEN 195
Query: 738 KGITPTAASVRVLATGLCLSGKVSRA 815
I P + + G C GK +A
Sbjct: 196 GKIGPDVVTYNTMIKGYCQVGKTQKA 221
>ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18
[Arabidopsis thaliana] gi|332189465|gb|AEE27586.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 660
Score = 399 bits (1024), Expect = e-109
Identities = 186/270 (68%), Positives = 228/270 (84%), Gaps = 1/270 (0%)
Frame = +3
Query: 12 ERDKITYLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYT 191
E DKITY+T++QA Y+DSD+ SC+ LY EM+EK +++PPHA+SLVIGGLC++GK E YT
Sbjct: 289 EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYT 348
Query: 192 LFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLC 371
+FENMI+KG K NVA+YT L+D YAKSG +E+ IRL R+ EGFKPD VTY V+VN LC
Sbjct: 349 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Query: 372 KTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSY 551
K GR+EEA+ YF CR + +A+N+MFYSSLIDG GKAGR+DEAE+LFEEM GC+RDSY
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 552 CYNALIDALAKNGKIDEALVLFKRM-ESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDL 728
CYNALIDA K+ K+DEA+ LFKRM E EGCDQTVYTYTI+++G+F +HRNEEALK+WD+
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 528
Query: 729 MIDKGITPTAASVRVLATGLCLSGKVSRAC 818
MIDKGITPTAA R L+TGLCLSGKV+RAC
Sbjct: 529 MIDKGITPTAACFRALSTGLCLSGKVARAC 558
Score = 105 bits (263), Expect = 9e-21
Identities = 64/248 (25%), Positives = 115/248 (46%)
Frame = +3
Query: 72 DSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYTLFENMIQKGRKANVAMYTAL 251
+ L ++ +M+E +E + Y+ ++ GL A +FE M K ++ Y +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 252 MDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLEEAIRYFELCRENKV 431
+ Y K+G ++ + + + G + D++TY ++ + ++ E +
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323
Query: 432 AVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALIDALAKNGKIDEALV 611
V +S +I G K G+L+E +FE M+ G + Y LID AK+G +++A+
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 612 LFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPTAASVRVLATGLC 791
L RM EG V TY++++NGL R EEAL + G+ + L GL
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443
Query: 792 LSGKVSRA 815
+G+V A
Sbjct: 444 KAGRVDEA 451
Score = 102 bits (255), Expect = 8e-20
Identities = 62/262 (23%), Positives = 119/262 (45%)
Frame = +3
Query: 30 YLTLLQAYYSDSDYDSCLKLYNEMEEKELEIPPHAYSLVIGGLCRDGKPMEAYTLFENMI 209
Y++L+ D D + +E+++ E + A + +I + G E ++ M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 210 QKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLE 389
+ G + + Y LM+ + ++ R+FE + S KPD VTY ++ CK G+ +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 390 EAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALI 569
+A+ + + Y ++I L++EM G + ++ +I
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 570 DALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGIT 749
L K GK++E +F+ M +G V YT++++G E+A+++ MID+G
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 750 PTAASVRVLATGLCLSGKVSRA 815
P + V+ GLC +G+V A
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEA 416
Score = 73.6 bits (179), Expect = 5e-11
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Frame = +3
Query: 15 RDKITYLTLLQAYYSDSDYDSCLKLYNEMEEKE-LEIPPHAYSLVIGGLCRDGKPMEAYT 191
RD Y L+ A+ D + L+ MEE+E + + Y++++ G+ ++ + EA
Sbjct: 465 RDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALK 524
Query: 192 LFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLC 371
L++ MI KG A + AL SG + ++ + L G D +I N LC
Sbjct: 525 LWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLC 583
Query: 372 KTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSR 542
K GR++EA + + E V + +I+ K G+ D A KL + G R
Sbjct: 584 KAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYER 640
Score = 69.7 bits (169), Expect = 7e-10
Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 1/233 (0%)
Frame = +3
Query: 114 LEIPPHAYSLVIGGLCRDGKPMEAYTLF-ENMIQKGRKANVAMYTALMDAYAKSGHIEEV 290
+++ P+ S V+ KP A++ F + QK N+ Y +L+D A + ++ +
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171
Query: 291 IRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDG 470
+ + F ++ K G +EE + + +EN + Y+ L++G
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 471 FGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQT 650
A +D AE++FE M + D YN +I K G+ +A+ + ME+ G +
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 651 VYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPTAASVRVLATGLCLSGKVS 809
TY ++ + + ++ M +KGI + ++ GLC GK++
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLN 344