BLASTX nr result

ID: Atractylodes22_contig00034117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034117
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   113   2e-23
ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arab...   112   3e-23
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...   107   1e-21
ref|XP_003630102.1| F-box protein SKIP19 [Medicago truncatula] g...   103   1e-20
ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein...   103   2e-20

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  113 bits (282), Expect = 2e-23
 Identities = 66/150 (44%), Positives = 90/150 (60%), Gaps = 12/150 (8%)
 Frame = +2

Query: 2   IGVHDILENAQEVCNVWRNISRDPAMWRVIHLDGRHLILDDDEVGDL----------CKE 151
           +G  DILENAQ+VC  WR + +DP+MWR I         D D +GDL          C+ 
Sbjct: 362 LGTIDILENAQKVCRSWRRVCKDPSMWRKI---------DMDNLGDLGAMGYDLEIMCRH 412

Query: 152 AVYRSHGQLIDITMVGFCDDELLLYVANRSSQLRRLKIACCGAIG--SWSEALRKLPLLE 325
           AV RS G L++I +  F  DELL Y+A+RSS LR L++  C  I    + EA+ KLPL+E
Sbjct: 413 AVDRSQGGLVEIDIWYFGTDELLNYIADRSSNLRTLRLIMCYPIADEGFIEAVVKLPLIE 472

Query: 326 VLSVYSTYITKEAIETVGRYCPMLKTLKLN 415
            L +    ++ E+++ VG+ CP LKTLKLN
Sbjct: 473 YLELSHCSLSGESLKVVGQSCPNLKTLKLN 502



 Score =  101 bits (252), Expect = 5e-20
 Identities = 65/150 (43%), Positives = 88/150 (58%), Gaps = 12/150 (8%)
 Frame = +2

Query: 2   IGVHDILENAQEVCNVWRNISRDPAMWRVIHLD--GRHLILDDDEVGDLCKEAVYRSHGQ 175
           +GV +ILENAQ+VC  WR + +DP+MWR I +D  G   I   D +  +C+ AV RS G 
Sbjct: 24  LGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNSGNRDIFKYD-LDSMCRHAVDRSQGG 82

Query: 176 LIDITMVGFCDDELLLYVANR--------SSQLRRLKIACCGAI--GSWSEALRKLPLLE 325
           L++I +  F  D+LL Y+A+R        SS LR L++  C  I     +EA+ KLPLLE
Sbjct: 83  LLEIDIEYFGTDKLLDYIADRFSLSLFSISSNLRSLRLVRCHQITDKGVAEAVVKLPLLE 142

Query: 326 VLSVYSTYITKEAIETVGRYCPMLKTLKLN 415
            L V     + E +  VG+ CP L TLKLN
Sbjct: 143 DLEVSYCSFSGECLSVVGQSCPHLTTLKLN 172


>ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arabidopsis lyrata subsp.
           lyrata] gi|297309088|gb|EFH39513.1| hypothetical protein
           ARALYDRAFT_332995 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score =  112 bits (280), Expect = 3e-23
 Identities = 67/144 (46%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
 Frame = +2

Query: 2   IGVHDILENAQEVCNVWRNISRDPAMWRVIHL----DGRHLILDDDEVGDLCKEAVYRSH 169
           +G  DILENAQ+VC  WR +S DP MWR I +    D   +I D +    +C+ AV RS 
Sbjct: 33  LGAIDILENAQKVCTSWRRVSLDPLMWRKIDMHYLGDMGSMIYDFES---MCRHAVDRSQ 89

Query: 170 GQLIDITMVGFCDDELLLYVANRSSQLRRLKIACCGAI--GSWSEALRKLPLLEVLSVYS 343
           G L++I +  F  D+LL Y+A+RSS LR L++A C  I     +EA+ KLPLLE L V  
Sbjct: 90  GGLVEIDIWHFGTDDLLNYIADRSSNLRSLRLAMCNQITDEGVTEAVVKLPLLEDLDVSF 149

Query: 344 TYITKEAIETVGRYCPMLKTLKLN 415
                E++  VG+ CP LKTLKLN
Sbjct: 150 CAFLGESLRVVGQSCPNLKTLKLN 173


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/141 (40%), Positives = 89/141 (63%), Gaps = 3/141 (2%)
 Frame = +2

Query: 2   IGVHDILENAQEVCNVWRNISRDPAMWRVIHLDGRH-LILDDDEVGDLCKEAVYRSHGQL 178
           +G  +IL+NAQ+VC  W  + +DP+MWR I +D R+       ++  +C+ AV RSHG L
Sbjct: 196 LGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGL 255

Query: 179 IDITMVGFCDDELLLYVANRSSQLRRLKIACCGAI--GSWSEALRKLPLLEVLSVYSTYI 352
           I+I +  +  ++L++Y+A+RSS L+ L +  C  I     ++A+ K+PLLE L V     
Sbjct: 256 IEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLF 315

Query: 353 TKEAIETVGRYCPMLKTLKLN 415
           + E++  +GR CP LKTLKLN
Sbjct: 316 SGESLRDIGRSCPNLKTLKLN 336


>ref|XP_003630102.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355524124|gb|AET04578.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 307

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
 Frame = +2

Query: 2   IGVHDILENAQEVCNVWRNISRDPAMWRVIHLDGRHLIL--------DDDEVGDLCKEAV 157
           +G  +IL NA+ VC  W NI +DP MWR I +   HL          D D +  LC+ AV
Sbjct: 37  LGAVEILTNARNVCPYWWNICKDPFMWREIQMGTFHLYFQYANADAPDLDYLVKLCQYAV 96

Query: 158 YRSHGQLIDITMVGFCDDELLLYVANRSSQLRRLKIACCGAIGS--WSEALRKLPLLEVL 331
             S G L  I +  F  D LL Y+A+R+S LR +++A C  +    W EA +K PLLE +
Sbjct: 97  DLSSGHLEKIDIYRFGSDHLLQYIADRASNLRHIQLASCMRVSDEGWCEAAKKFPLLEEI 156

Query: 332 SVYSTYITKEAIETVGRYCPMLKTLKLN 415
            +   + TK ++E +G+ CP+LK+L  N
Sbjct: 157 DISHGFQTKISLEVIGQNCPLLKSLVYN 184


>ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus] gi|449490717|ref|XP_004158686.1| PREDICTED:
           putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 318

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
 Frame = +2

Query: 2   IGVHDILENAQEVCNVWRNISRDPAMWRVIHLD-GRHLILDDDEVGDLCKEAVYRSHGQL 178
           +G  +I +N Q VC+ WR +  DP MWR I +    +    +  +   C+  V  S G L
Sbjct: 21  VGAIEIFQNVQYVCSSWRKLCMDPLMWRTIDMRISGNFPRRNYYLRAACRYGVDLSRGHL 80

Query: 179 IDITMVGFCDDELLLYVANRSSQLRRLKIACCGAIGSWS--EALRKLPLLEVLSVYSTYI 352
           IDI++  F  D LLLY+A RS++L+RL IA C  I      +A  KLPLLE L ++    
Sbjct: 81  IDISIESFATDSLLLYIARRSNELKRLWIADCFCISDMGLIKAASKLPLLEQLEIFLCCF 140

Query: 353 TKEAIETVGRYCPMLKTLKLN 415
               + TVGR CP+LK+LKLN
Sbjct: 141 DSRTLGTVGRCCPLLKSLKLN 161


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