BLASTX nr result

ID: Atractylodes22_contig00034108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034108
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   8e-06
emb|CAA73798.1| reverse transcriptase [Beta vulgaris subsp. vulg...    55   8e-06

>emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
 Frame = +2

Query: 44  KLKAIKLALKEWS*SRFGAIDEEIDRASSEVRKWELAAESRPLSTEEHNLWREARANWLV 223
           KLK +KL LK W+   FG ID  I    +E++KW+  A SR L  EE     +A+     
Sbjct: 270 KLKKVKLDLKTWNSESFGNIDANILLREAEIQKWDSEANSRDLEPEEIKTRAQAQLELWE 329

Query: 224 LDYXXXXXXXXXXXXXXVVEGDENSKYFH--SSLR--KNNLLKRWKGLSV*GICSENPKE 391
                            +  GD N+K+FH  +S+R  KNN+      + + G   E+P  
Sbjct: 330 WLKKKEIYWAQQSRIKWLKSGDRNTKFFHICASIRRSKNNI----SSILLQGKKIEDPII 385

Query: 392 IKNEAFDYW 418
           IK EA  Y+
Sbjct: 386 IKEEAVKYF 394


>emb|CAA73798.1| reverse transcriptase [Beta vulgaris subsp. vulgaris]
          Length = 507

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/131 (28%), Positives = 56/131 (42%)
 Frame = +2

Query: 26  SSFEPNKLKAIKLALKEWS*SRFGAIDEEIDRASSEVRKWELAAESRPLSTEEHNLWREA 205
           +S  P+KL+ +K ALK+W+   FG ID+ I     ++   +  A SR L T E     +A
Sbjct: 134 NSSVPDKLRTLKEALKQWNQKEFGIIDDNIKHCEEKIHFLDNIANSRLLCTNELQERDDA 193

Query: 206 RANWLVLDYXXXXXXXXXXXXXXVVEGDENSKYFHSSLRKNNLLKRWKGLSV*GICSENP 385
           + N                    + EGD N++YFH+           + +   G     P
Sbjct: 194 QLNLWTWLKRSESYWALNSRARWIKEGDSNTRYFHTLATIRRHKNHLQYIKTEGKNISKP 253

Query: 386 KEIKNEAFDYW 418
            EIK EA  Y+
Sbjct: 254 GEIKEEAVAYF 264


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