BLASTX nr result

ID: Atractylodes22_contig00034089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034089
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   118   4e-25
gb|ABW74566.1| integrase [Boechera divaricarpa]                       112   2e-23
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   109   2e-22
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   108   6e-22
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   105   3e-21

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/102 (58%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
 Frame = -2

Query: 304 GCSHHVTGDKSKFKDLDESFKSRVRLGDNKQVQIEGRGTVLIKVGQSS-KLIKNVDYAPS 128
           GCS+H++  KS F+DLDES KS VRLGD+KQV IEG+GTV IK  Q + K + +V Y P+
Sbjct: 316 GCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPT 375

Query: 127 LAHNLISVGQLIESGHSVVFDDSQCMIKNEGSGKVLAQANMT 2
           LAHNL+SVGQL+ SG+SVVF D+ C IK++ SG+ +A+  MT
Sbjct: 376 LAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMT 417


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/102 (53%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = -2

Query: 304 GCSHHVTGDKSKFKDLDESFKSRVRLGDNKQVQIEGRGTVLIKVGQSS-KLIKNVDYAPS 128
           GCS+H+TG KS FK+LDES K +V+LG++K+VQ+EGRG V +  G  + KLI  V Y P 
Sbjct: 152 GCSNHMTGTKSSFKELDESHKLKVKLGNDKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPD 211

Query: 127 LAHNLISVGQLIESGHSVVFDDSQCMIKNEGSGKVLAQANMT 2
           LAHNL+SVGQ++E+  SV+FD ++C+IK + SG  LA    T
Sbjct: 212 LAHNLLSVGQMVENNCSVLFDGNECVIKEKKSGVTLAMVKKT 253


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/101 (51%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
 Frame = -2

Query: 304 GCSHHVTGDKSKFKDLDESFKSRVRLGDNKQVQIEGRGTVLIKVGQSS-KLIKNVDYAPS 128
           GCS+H+TG KS FK+LDES K +V+LGD+KQVQ+EG+GT  +  G  + KL+ NV + PS
Sbjct: 296 GCSNHMTGIKSLFKELDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPS 355

Query: 127 LAHNLISVGQLIESGHSVVFDDSQCMIKNEGSGKVLAQANM 5
           L  NL+SVGQL+ SG+S++FD + C+IK++ S +++    M
Sbjct: 356 LTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVBVRM 396


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/101 (51%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
 Frame = -2

Query: 304 GCSHHVTGDKSKFKDLDESFKSRVRLGDNKQVQIEGRGTVLIKVGQSS-KLIKNVDYAPS 128
           GCS+H+TG KS FK+LDES K +V+LGD+KQV +EG+GTV +  G  + KL+ NV + PS
Sbjct: 297 GCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGTVAVNNGHGNVKLLYNVYFIPS 356

Query: 127 LAHNLISVGQLIESGHSVVFDDSQCMIKNEGSGKVLAQANM 5
           L  NL+SVGQL+ SG+S++FD S C+IK++   +++    M
Sbjct: 357 LTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRM 397


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/101 (49%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
 Frame = -2

Query: 304 GCSHHVTGDKSKFKDLDESFKSRVRLGDNKQVQIEGRGTVLIKVGQSS-KLIKNVDYAPS 128
           GCS+H+TG KS FK+LDES K +V+LGD+KQV +EG+G + +  G  + KL+ NV + PS
Sbjct: 311 GCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPS 370

Query: 127 LAHNLISVGQLIESGHSVVFDDSQCMIKNEGSGKVLAQANM 5
           L  NL+SVGQL+ SG+S++FD + C+IK++ S +++    M
Sbjct: 371 LTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRM 411


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