BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034029
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870994.1| pentatricopeptide repeat-containing protein ...   129   2e-28
ref|XP_002518652.1| pentatricopeptide repeat-containing protein,...   129   2e-28
ref|NP_195906.1| pentatricopeptide repeat-containing protein [Ar...   128   4e-28
ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28
ref|XP_002298762.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27

>ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316831|gb|EFH47253.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 819

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/87 (71%), Positives = 76/87 (87%)
 Frame = -3

Query: 261 LRGSVVAVIISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAV 82
           L  SV+A++ISMLGK GRVS A++L  GLQ+DGF +DVY+YTSLISA A +GR+REA+ V
Sbjct: 171 LDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230

Query: 81  FKEMEEEGCQPTKITYNVILNVYGKMG 1
           FK+MEEEGC+PT ITYNVILNV+GKMG
Sbjct: 231 FKKMEEEGCKPTLITYNVILNVFGKMG 257



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -3

Query: 240 VIISMLGKNGRV-SDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEE 64
           VI+++ GK G   +  +SL+  ++ DG   D Y Y +LI+        +EA  VF+EM+ 
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307

Query: 63  EGCQPTKITYNVILNVYGK 7
            G    K+TYN +L+VYGK
Sbjct: 308 AGFSHDKVTYNALLDVYGK 326



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/79 (32%), Positives = 43/79 (54%)
 Frame = -3

Query: 237 IISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEEEG 58
           +IS   ++G + +A  L   + + G   DV+ YT+L+S     G+   AM +F+EM   G
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAG 414

Query: 57  CQPTKITYNVILNVYGKMG 1
           C+P   T+N  + +YG  G
Sbjct: 415 CKPNICTFNAFIKMYGNRG 433



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
 Frame = -3

Query: 267 KALRGSVVA--VIISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFRE 94
           K ++  +++   +I    +N R+ DAS +   ++  G V DV  Y + I + A +  F E
Sbjct: 693 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEE 752

Query: 93  AMAVFKEMEEEGCQPTKITYNVILNVYGKM 4
           A+ V + M + GC+P + TYN I++ Y K+
Sbjct: 753 AIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782


>ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542033|gb|EEF43577.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 827

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/87 (73%), Positives = 76/87 (87%)
 Frame = -3

Query: 261 LRGSVVAVIISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAV 82
           L  SVVAVII+MLGK G+VS ASS++  L+KDGF +DVYAYTSLI+A A NGR+R+A+ V
Sbjct: 180 LNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLV 239

Query: 81  FKEMEEEGCQPTKITYNVILNVYGKMG 1
           FK+MEEEGC+PT ITYNVILNVYGKMG
Sbjct: 240 FKKMEEEGCKPTLITYNVILNVYGKMG 266



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -3

Query: 240 VIISMLGKNGRV-SDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEE 64
           VI+++ GK G   S  S L+ G++  G   D Y Y +LIS       + EA  VF+EM+ 
Sbjct: 257 VILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKL 316

Query: 63  EGCQPTKITYNVILNVYGK 7
            G  P K+T+N +L+VYGK
Sbjct: 317 SGFSPDKVTFNTLLDVYGK 335



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/79 (34%), Positives = 48/79 (60%)
 Frame = -3

Query: 237 IISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEEEG 58
           ++++ G+NG  S+ S + + +++ GFV +   + +LISA +  G F++AMAV+K M E G
Sbjct: 469 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAG 528

Query: 57  CQPTKITYNVILNVYGKMG 1
             P   +YN +L    + G
Sbjct: 529 VTPDLSSYNAVLAALARGG 547



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/79 (34%), Positives = 46/79 (58%)
 Frame = -3

Query: 237 IISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEEEG 58
           ++ + GK+ R  +A  +++ ++  GF   +  Y SLISA A +G  REAM +  +M E+G
Sbjct: 329 LLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKG 388

Query: 57  CQPTKITYNVILNVYGKMG 1
            +P   TY  +L+ + K G
Sbjct: 389 IKPDVFTYTTLLSGFEKAG 407


>ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g02860 gi|7413561|emb|CAB86040.1| putative protein
           [Arabidopsis thaliana] gi|332003145|gb|AED90528.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 819

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/87 (71%), Positives = 76/87 (87%)
 Frame = -3

Query: 261 LRGSVVAVIISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAV 82
           L  SVVA+IISMLGK GRVS A+++  GLQ+DGF +DVY+YTSLISA A +GR+REA+ V
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230

Query: 81  FKEMEEEGCQPTKITYNVILNVYGKMG 1
           FK+MEE+GC+PT ITYNVILNV+GKMG
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMG 257



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/79 (32%), Positives = 44/79 (55%)
 Frame = -3

Query: 237 IISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEEEG 58
           +IS   ++G + +A  L   + + G   DV+ YT+L+S     G+   AM++F+EM   G
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414

Query: 57  CQPTKITYNVILNVYGKMG 1
           C+P   T+N  + +YG  G
Sbjct: 415 CKPNICTFNAFIKMYGNRG 433



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -3

Query: 240 VIISMLGKNGRV-SDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEE 64
           VI+++ GK G   +  +SL+  ++ DG   D Y Y +LI+        +EA  VF+EM+ 
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307

Query: 63  EGCQPTKITYNVILNVYGK 7
            G    K+TYN +L+VYGK
Sbjct: 308 AGFSYDKVTYNALLDVYGK 326



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
 Frame = -3

Query: 267 KALRGSVVA--VIISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFRE 94
           K ++  +++   +I    +N R+ DAS +   ++  G V DV  Y + I + A +  F E
Sbjct: 693 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEE 752

Query: 93  AMAVFKEMEEEGCQPTKITYNVILNVYGKM 4
           A+ V + M + GC+P + TYN I++ Y K+
Sbjct: 753 AIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782


>ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  128 bits (321), Expect = 5e-28
 Identities = 63/91 (69%), Positives = 75/91 (82%)
 Frame = -3

Query: 273 SRKALRGSVVAVIISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFRE 94
           S   L GS++AVIIS+LGK GRVS A+SL+  L KDGF +DVYAYTS+I+A   NGR+RE
Sbjct: 159 SELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYRE 218

Query: 93  AMAVFKEMEEEGCQPTKITYNVILNVYGKMG 1
           A+ VFK+MEE GC+PT ITYNVILNVYGKMG
Sbjct: 219 AVMVFKKMEEVGCKPTLITYNVILNVYGKMG 249



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/79 (32%), Positives = 46/79 (58%)
 Frame = -3

Query: 237 IISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEEEG 58
           +IS   ++G + DA  L   + + G   DV+ YT+L+S     G+ + A+ +F+EM  EG
Sbjct: 347 LISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEG 406

Query: 57  CQPTKITYNVILNVYGKMG 1
           C+P   T+N ++ ++G  G
Sbjct: 407 CKPNICTFNALIKMHGNRG 425



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = -3

Query: 240 VIISMLGKNGRV-SDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEE 64
           VI+++ GK G   +    L+  ++  G   D Y Y +LIS       + EA  V KEM+ 
Sbjct: 240 VILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKL 299

Query: 63  EGCQPTKITYNVILNVYGK 7
            G  P K+TYN +L+VYGK
Sbjct: 300 AGFSPDKVTYNALLDVYGK 318



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/79 (34%), Positives = 47/79 (59%)
 Frame = -3

Query: 237 IISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEEEG 58
           ++S+ G+NG  S+ S + + +++ GFV +   + +LIS+ +  G F +AMAV+K M E G
Sbjct: 452 LLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAG 511

Query: 57  CQPTKITYNVILNVYGKMG 1
             P   +YN +L    + G
Sbjct: 512 VNPDLSSYNAVLAALARGG 530


>ref|XP_002298762.1| predicted protein [Populus trichocarpa] gi|222846020|gb|EEE83567.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/82 (75%), Positives = 71/82 (86%)
 Frame = -3

Query: 246 VAVIISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEME 67
           VAVIISMLGK G+VS A+SL+  L KDGF +DVYAYTSLI+A   NGR+REA+ VFK+ME
Sbjct: 1   VAVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKME 60

Query: 66  EEGCQPTKITYNVILNVYGKMG 1
           EEGC+PT ITYNVILNVYGKMG
Sbjct: 61  EEGCKPTLITYNVILNVYGKMG 82



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = -3

Query: 240 VIISMLGKNGRV-SDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEE 64
           VI+++ GK G   +    L  G++  G + D Y Y +LI+         EA AVFK+M+ 
Sbjct: 73  VILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKS 132

Query: 63  EGCQPTKITYNVILNVYGK 7
            G  P K+TYN +L+VYGK
Sbjct: 133 MGFVPDKVTYNALLDVYGK 151



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/79 (32%), Positives = 44/79 (55%)
 Frame = -3

Query: 237 IISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEEEG 58
           +IS   ++G + +A  L   + + G  +DV+ YT+L+S     G+   AM VF EM   G
Sbjct: 180 LISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAG 239

Query: 57  CQPTKITYNVILNVYGKMG 1
           C+P   T+N ++ ++G  G
Sbjct: 240 CKPNICTFNALIKMHGNRG 258



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/79 (34%), Positives = 46/79 (58%)
 Frame = -3

Query: 237 IISMLGKNGRVSDASSLIRGLQKDGFVIDVYAYTSLISASAGNGRFREAMAVFKEMEEEG 58
           ++++ G+NG  S+ S + + +++ GFV +   Y +LISA +  G F +AM ++K M E G
Sbjct: 285 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAG 344

Query: 57  CQPTKITYNVILNVYGKMG 1
             P   TYN +L    + G
Sbjct: 345 ITPDLSTYNAVLAALARGG 363