BLASTX nr result

ID: Atractylodes22_contig00034028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034028
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    85   5e-15
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    79   3e-13
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...    77   1e-12
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    77   2e-12
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    76   2e-12

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = -1

Query: 203 NETAVAIGENLHELEHLDLVGDIMSNIGLQTILDGCHHLKSLDLRQCLYIDLKGDLGKRC 24
           NE A+AI E++ EL HL L G+I++N+GL  ILDGC HL+ LDLR+C  +DL GDL KRC
Sbjct: 516 NEEALAIAESMPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRC 575

Query: 23  SEQIKCL 3
            E+IK L
Sbjct: 576 VERIKDL 582



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/71 (49%), Positives = 48/71 (67%)
 Frame = -1

Query: 215 IMIQNETAVAIGENLHELEHLDLVGDIMSNIGLQTILDGCHHLKSLDLRQCLYIDLKGDL 36
           I +++  A+AI E++ EL HL L+G+ ++N GL  ILD C HL  LDLRQC  I+L  D 
Sbjct: 181 INMRDHNAIAIAESMPELRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNINLVEDF 240

Query: 35  GKRCSEQIKCL 3
            K+C E+IK L
Sbjct: 241 MKQCVERIKYL 251


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/65 (58%), Positives = 47/65 (72%)
 Frame = -1

Query: 203 NETAVAIGENLHELEHLDLVGDIMSNIGLQTILDGCHHLKSLDLRQCLYIDLKGDLGKRC 24
           +E A AI E +  L HL L G+ ++N GL  ILDGC HL+SLDLRQC  ++L G LGKRC
Sbjct: 188 DEEAFAIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRC 247

Query: 23  SEQIK 9
           +EQIK
Sbjct: 248 AEQIK 252


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 49/67 (73%)
 Frame = -1

Query: 203 NETAVAIGENLHELEHLDLVGDIMSNIGLQTILDGCHHLKSLDLRQCLYIDLKGDLGKRC 24
           ++ A AI E++ EL HL L+G+ ++N GL  ILDGC HL+ LDLRQC  I+L GDL KRC
Sbjct: 349 DDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRC 408

Query: 23  SEQIKCL 3
            E+IK L
Sbjct: 409 FERIKDL 415



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = -1

Query: 203 NETAVAIGENLHELEHLDLVGDIMSNIGLQTILDGCHHLKSLDLRQCLYIDLKGDLGKRC 24
           ++  +AI E + EL HL L G+ ++N+ L+ ILD C HL  LDLR+C  I+L GDL KRC
Sbjct: 19  DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRC 78

Query: 23  SEQIKCL 3
           SE+I+ L
Sbjct: 79  SERIRDL 85


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/67 (55%), Positives = 48/67 (71%)
 Frame = -1

Query: 203 NETAVAIGENLHELEHLDLVGDIMSNIGLQTILDGCHHLKSLDLRQCLYIDLKGDLGKRC 24
           ++ A +I + +  L HL LVG+ MS  GL+ ILDGC HL+SLD+RQC  + L+G LGKRC
Sbjct: 192 DDEAFSIAKTMPGLRHLMLVGNKMSKDGLRAILDGCPHLESLDIRQCFNLSLRGSLGKRC 251

Query: 23  SEQIKCL 3
            EQIK L
Sbjct: 252 REQIKYL 258


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/67 (55%), Positives = 50/67 (74%)
 Frame = -1

Query: 203 NETAVAIGENLHELEHLDLVGDIMSNIGLQTILDGCHHLKSLDLRQCLYIDLKGDLGKRC 24
           +E A+AI +N+  L+ L L G+ ++N GL  ILDGC HL+SLDLRQC  ++L G+L KRC
Sbjct: 187 DEEALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRC 246

Query: 23  SEQIKCL 3
           +EQIK L
Sbjct: 247 AEQIKIL 253


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