BLASTX nr result

ID: Atractylodes22_contig00033985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033985
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP25262.1| alpha-tubulin, partial [Diophrys apoligothrix]          44   3e-07
gb|AAN40721.1| alpha-tubulin [Strombidinopsis sp.]                     42   8e-07
gb|EGB03929.1| tubulin alpha-2 chain [Aureococcus anophagefferen...    42   1e-06
gb|ABV72532.1| tubulin alpha chain [Heterocapsa triquetra]             42   1e-06
gb|ABV72559.1| tubulin alpha chain [Heterocapsa rotundata]             42   1e-06

>gb|AFP25262.1| alpha-tubulin, partial [Diophrys apoligothrix]
          Length = 384

 Score = 43.5 bits (101), Expect(2) = 3e-07
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +3

Query: 3   HGKYMTCCFMYLGDVVHKYINAS 71
           HGKYMTCC MY GDVV K +NAS
Sbjct: 280 HGKYMTCCLMYRGDVVPKDVNAS 302



 Score = 35.8 bits (81), Expect(2) = 3e-07
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 86  LKTKRTIQFVD*CPTGF 136
           +KTKRTIQFVD CPTGF
Sbjct: 306 IKTKRTIQFVDWCPTGF 322


>gb|AAN40721.1| alpha-tubulin [Strombidinopsis sp.]
          Length = 363

 Score = 42.0 bits (97), Expect(2) = 8e-07
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +3

Query: 3   HGKYMTCCFMYLGDVVHKYINAS 71
           HGKYM CC MY GDVV K +NAS
Sbjct: 267 HGKYMACCLMYXGDVVPKDVNAS 289



 Score = 35.8 bits (81), Expect(2) = 8e-07
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 86  LKTKRTIQFVD*CPTGF 136
           +KTKRTIQFVD CPTGF
Sbjct: 293 IKTKRTIQFVDWCPTGF 309


>gb|EGB03929.1| tubulin alpha-2 chain [Aureococcus anophagefferens]
           gi|323451904|gb|EGB07780.1| tubulin alpha-2 chain
           [Aureococcus anophagefferens]
           gi|323454324|gb|EGB10194.1| tubulin alpha-2 chain
           [Aureococcus anophagefferens]
           gi|323456012|gb|EGB11879.1| tubulin alpha-2 chain
           [Aureococcus anophagefferens]
           gi|323457178|gb|EGB13044.1| tubulin alpha-2 chain
           [Aureococcus anophagefferens]
          Length = 453

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +3

Query: 3   HGKYMTCCFMYLGDVVHKYINAS 71
           HGKYM CC MY GDVV K +NAS
Sbjct: 309 HGKYMACCLMYRGDVVPKDVNAS 331



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 86  LKTKRTIQFVD*CPTGF 136
           +KTKRTIQFVD CPTGF
Sbjct: 335 IKTKRTIQFVDWCPTGF 351


>gb|ABV72532.1| tubulin alpha chain [Heterocapsa triquetra]
          Length = 453

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +3

Query: 3   HGKYMTCCFMYLGDVVHKYINAS 71
           HGKYM CC MY GDVV K +NAS
Sbjct: 309 HGKYMACCMMYRGDVVPKDVNAS 331



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 86  LKTKRTIQFVD*CPTGF 136
           +KTKRTIQFVD CPTGF
Sbjct: 335 IKTKRTIQFVDWCPTGF 351


>gb|ABV72559.1| tubulin alpha chain [Heterocapsa rotundata]
          Length = 452

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +3

Query: 3   HGKYMTCCFMYLGDVVHKYINAS 71
           HGKYM CC MY GDVV K +NAS
Sbjct: 308 HGKYMACCMMYRGDVVPKDVNAS 330



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 86  LKTKRTIQFVD*CPTGF 136
           +KTKRTIQFVD CPTGF
Sbjct: 334 IKTKRTIQFVDWCPTGF 350


Top