BLASTX nr result

ID: Atractylodes22_contig00033947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033947
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34813.3| unnamed protein product [Vitis vinifera]              182   9e-44
ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCA...   182   9e-44
gb|ABL63118.1| AT-hook DNA-binding protein [Catharanthus roseus]      181   1e-43
ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|2...   180   3e-43
ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|2...   179   7e-43

>emb|CBI34813.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  182 bits (461), Expect = 9e-44
 Identities = 89/103 (86%), Positives = 95/103 (92%)
 Frame = +3

Query: 384 AGSKNKPKPPIIITRDSANALRTHVMEVADGCDVMESIATFARRRQRGVCIMSGSGTVTN 563
           AGSKNKPKPPIIITRDSANALRTHVME+ADGCD++ES+ATFARRRQRGVCIMSG+GTVTN
Sbjct: 36  AGSKNKPKPPIIITRDSANALRTHVMEIADGCDIVESVATFARRRQRGVCIMSGTGTVTN 95

Query: 564 VTLRQPASPGAVVTLHGRFEILSLSGSFLXXXXXXXXTGLTIY 692
           VTLRQPASPGA+VTLHGRFEILSLSGSFL        TGLTIY
Sbjct: 96  VTLRQPASPGAIVTLHGRFEILSLSGSFLPPPAPPAATGLTIY 138


>ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 302

 Score =  182 bits (461), Expect = 9e-44
 Identities = 89/103 (86%), Positives = 95/103 (92%)
 Frame = +3

Query: 384 AGSKNKPKPPIIITRDSANALRTHVMEVADGCDVMESIATFARRRQRGVCIMSGSGTVTN 563
           AGSKNKPKPPIIITRDSANALRTHVME+ADGCD++ES+ATFARRRQRGVCIMSG+GTVTN
Sbjct: 89  AGSKNKPKPPIIITRDSANALRTHVMEIADGCDIVESVATFARRRQRGVCIMSGTGTVTN 148

Query: 564 VTLRQPASPGAVVTLHGRFEILSLSGSFLXXXXXXXXTGLTIY 692
           VTLRQPASPGA+VTLHGRFEILSLSGSFL        TGLTIY
Sbjct: 149 VTLRQPASPGAIVTLHGRFEILSLSGSFLPPPAPPAATGLTIY 191



 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 7/64 (10%)
 Frame = +1

Query: 73  MDQITASSHGHPLPPPFHTRNFNL-----HQF--QQQNSEDEQSGTSGLNMGGHKREREE 231
           MD +TA  HGH LPPPFHTR+ +L     HQF  QQQNSEDEQSG+SGLN  G KR+R++
Sbjct: 1   MDPVTA--HGHSLPPPFHTRDLHLHHQQQHQFHPQQQNSEDEQSGSSGLNR-GQKRDRDD 57

Query: 232 KSND 243
            + +
Sbjct: 58  NNEN 61


>gb|ABL63118.1| AT-hook DNA-binding protein [Catharanthus roseus]
          Length = 293

 Score =  181 bits (460), Expect = 1e-43
 Identities = 90/103 (87%), Positives = 94/103 (91%)
 Frame = +3

Query: 384 AGSKNKPKPPIIITRDSANALRTHVMEVADGCDVMESIATFARRRQRGVCIMSGSGTVTN 563
           AGSKNKPKPPIIITRDSANALRTHVME+ADGCD+MES+ATFARRRQRGVCIMSGSGTVTN
Sbjct: 71  AGSKNKPKPPIIITRDSANALRTHVMEIADGCDIMESVATFARRRQRGVCIMSGSGTVTN 130

Query: 564 VTLRQPASPGAVVTLHGRFEILSLSGSFLXXXXXXXXTGLTIY 692
           VTLRQPASPGAVVTLHGRFEILSL+GSFL        T LTIY
Sbjct: 131 VTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAATSLTIY 173



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/49 (65%), Positives = 38/49 (77%), Gaps = 3/49 (6%)
 Frame = +1

Query: 103 HPLPPPFHTRNFNL-HQF--QQQNSEDEQSGTSGLNMGGHKREREEKSN 240
           H LPPPF+TR+FNL HQF  Q  NSEDEQSGTSGL     KR+R+EK++
Sbjct: 3   HSLPPPFNTRDFNLQHQFHHQNHNSEDEQSGTSGL-----KRDRDEKND 46


>ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|222846842|gb|EEE84389.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  180 bits (456), Expect = 3e-43
 Identities = 88/103 (85%), Positives = 95/103 (92%)
 Frame = +3

Query: 384 AGSKNKPKPPIIITRDSANALRTHVMEVADGCDVMESIATFARRRQRGVCIMSGSGTVTN 563
           AGSKNKPKPPIIITRDSANALRTH+MEVADGCD++ES+ATFARRRQRGVCIMSG+GTVTN
Sbjct: 93  AGSKNKPKPPIIITRDSANALRTHLMEVADGCDIVESVATFARRRQRGVCIMSGTGTVTN 152

Query: 564 VTLRQPASPGAVVTLHGRFEILSLSGSFLXXXXXXXXTGLTIY 692
           VTLRQPASPGA+VTLHGRFEILSL+GSFL        TGLTIY
Sbjct: 153 VTLRQPASPGAIVTLHGRFEILSLAGSFLPPPAPPAATGLTIY 195



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 11/67 (16%)
 Frame = +1

Query: 73  MDQITASSHGHPLPPPFHTRNFNLHQ----------FQQQNSEDEQSG-TSGLNMGGHKR 219
           MD +TA  HGH LPPPFHTR+F LHQ           QQQNSEDEQSG +SGLN    KR
Sbjct: 1   MDPVTA--HGHSLPPPFHTRDFQLHQQQQQQHQFHHQQQQNSEDEQSGSSSGLNK-SLKR 57

Query: 220 EREEKSN 240
           ER+E +N
Sbjct: 58  ERDESNN 64


>ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|222840972|gb|EEE78519.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  179 bits (453), Expect = 7e-43
 Identities = 87/103 (84%), Positives = 95/103 (92%)
 Frame = +3

Query: 384 AGSKNKPKPPIIITRDSANALRTHVMEVADGCDVMESIATFARRRQRGVCIMSGSGTVTN 563
           +GSKNKPKPPIIITRDSANALRTH+MEVADGCD++ES+ATFARRRQRGVCIMSG+GTVTN
Sbjct: 94  SGSKNKPKPPIIITRDSANALRTHLMEVADGCDIVESVATFARRRQRGVCIMSGTGTVTN 153

Query: 564 VTLRQPASPGAVVTLHGRFEILSLSGSFLXXXXXXXXTGLTIY 692
           VTLRQPASPGA+VTLHGRFEILSL+GSFL        TGLTIY
Sbjct: 154 VTLRQPASPGAIVTLHGRFEILSLAGSFLPPPAPPAATGLTIY 196



 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 41/68 (60%), Positives = 46/68 (67%), Gaps = 12/68 (17%)
 Frame = +1

Query: 73  MDQITASSHGHPLPPPFHTRNFNL--------HQF---QQQNSEDEQSG-TSGLNMGGHK 216
           MD +TA  HGH LPPPFHTR+F L        HQF   QQQNSEDEQSG +SGLN    K
Sbjct: 1   MDPVTA--HGHSLPPPFHTRDFQLHHHQQQQQHQFHHQQQQNSEDEQSGSSSGLNK-SLK 57

Query: 217 REREEKSN 240
           RER+E +N
Sbjct: 58  RERDENNN 65


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