BLASTX nr result

ID: Atractylodes22_contig00033919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033919
         (1066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    70   1e-09
ref|XP_003553237.1| PREDICTED: uncharacterized protein LOC100810...    61   4e-07
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    60   7e-07

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 34/61 (55%), Positives = 40/61 (65%)
 Frame = +3

Query: 420 WCPHNRMRNQHQINFSKAIDRMKTTLEYLHSDCWGPF*VPSLVGAWYFLSIIDDYLRMTQ 599
           +C H      H+  F KAI R K TL+Y+HSDCWGP  V SL G  +F+SIIDDY RMT 
Sbjct: 445 FCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTW 504

Query: 600 V 602
           V
Sbjct: 505 V 505


>ref|XP_003553237.1| PREDICTED: uncharacterized protein LOC100810733 [Glycine max]
          Length = 882

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 29/52 (55%), Positives = 34/52 (65%)
 Frame = +3

Query: 447 QHQINFSKAIDRMKTTLEYLHSDCWGPF*VPSLVGAWYFLSIIDDYLRMTQV 602
           QH + F K +   K  L+Y+H D WG   VPSL GA YFLSIIDDY RMT +
Sbjct: 633 QHWMKFPKVVHTTKAMLDYVHFDYWGSSRVPSLGGAMYFLSIIDDYSRMTWI 684


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 27/57 (47%), Positives = 37/57 (64%)
 Frame = +3

Query: 420 WCPHNRMRNQHQINFSKAIDRMKTTLEYLHSDCWGPF*VPSLVGAWYFLSIIDDYLR 590
           +C H       ++ F+KAI   +  L+Y+HSD WGP  VPS+ GA YFL++IDDY R
Sbjct: 425 FCEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGARYFLTLIDDYSR 481


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