BLASTX nr result

ID: Atractylodes22_contig00033910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033910
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC34408.1| ZF-HD homeobox protein [Flaveria bidentis]            163   2e-38
emb|CAC34413.1| ZF-HD homeobox protein [Flaveria trinervia]           153   2e-35
ref|XP_003621193.1| ZF-HD homeobox protein [Medicago truncatula]...   120   1e-25
ref|XP_002324056.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002283533.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   112   4e-23

>emb|CAC34408.1| ZF-HD homeobox protein [Flaveria bidentis]
          Length = 241

 Score =  163 bits (412), Expect = 2e-38
 Identities = 84/138 (60%), Positives = 88/138 (63%)
 Frame = +3

Query: 3   ECLKNHAASIGGHALDGCGEFMXXXXXXXXXXXXLKCAACGCHRNFHRREPTNDFPATRT 182
           +CLKNHA  IGGHA+DGCGEFM             KCAACGCHRNFHRREPT    ATRT
Sbjct: 19  QCLKNHAVGIGGHAVDGCGEFMPAPTYNPSQPSSFKCAACGCHRNFHRREPTTTTIATRT 78

Query: 183 HFIDFHRPHXXXXXXXXXXXXXXXXXXNYAYGRHLLLSLSTATDQNHTVTTPGTPMPIKI 362
           HFIDFH  H                  N+A G HLLLSL TA +QNHTV TP TP  IKI
Sbjct: 79  HFIDFHH-HHPSTSASLSPPSPPPEPTNFAVGPHLLLSLGTAAEQNHTVATPETPAAIKI 137

Query: 363 ENSSGRKRFRTKFSQDQK 416
              SGRKRFRTKFSQDQK
Sbjct: 138 ---SGRKRFRTKFSQDQK 152


>emb|CAC34413.1| ZF-HD homeobox protein [Flaveria trinervia]
          Length = 263

 Score =  153 bits (386), Expect = 2e-35
 Identities = 82/138 (59%), Positives = 86/138 (62%)
 Frame = +3

Query: 3   ECLKNHAASIGGHALDGCGEFMXXXXXXXXXXXXLKCAACGCHRNFHRREPTNDFPATRT 182
           +CLKNHA  IG HA+DGCGEFM             KCAACGCHRNFHRREPT    ATRT
Sbjct: 44  QCLKNHAVGIGCHAVDGCGEFMPAPTYNPSQPSSFKCAACGCHRNFHRREPT---IATRT 100

Query: 183 HFIDFHRPHXXXXXXXXXXXXXXXXXXNYAYGRHLLLSLSTATDQNHTVTTPGTPMPIKI 362
           HFIDFH  H                  N+A G HLLLSL TA +QNH V TP TP  IKI
Sbjct: 101 HFIDFHH-HHPSTSASLSPPSPAPELTNFAVGPHLLLSLGTAAEQNHMVATPETPAAIKI 159

Query: 363 ENSSGRKRFRTKFSQDQK 416
              SGRKRFRTKFSQDQK
Sbjct: 160 ---SGRKRFRTKFSQDQK 174


>ref|XP_003621193.1| ZF-HD homeobox protein [Medicago truncatula]
           gi|124359224|gb|ABN05735.1| Homeobox domain, ZF-HD
           class; ZF-HD homeobox protein Cys/His-rich dimerisation
           region; Homeodomain-like [Medicago truncatula]
           gi|124360958|gb|ABN08930.1| Homeobox domain, ZF-HD
           class; ZF-HD homeobox protein Cys/His-rich dimerisation
           region; Homeodomain-like [Medicago truncatula]
           gi|355496208|gb|AES77411.1| ZF-HD homeobox protein
           [Medicago truncatula]
          Length = 341

 Score =  120 bits (300), Expect = 1e-25
 Identities = 68/146 (46%), Positives = 81/146 (55%), Gaps = 8/146 (5%)
 Frame = +3

Query: 3   ECLKNHAASIGGHALDGCGEFMXXXXXXXXXXXXLKCAACGCHRNFHRREPTNDFPATRT 182
           ECLKNHAA++GGHALDGCGEFM            LKCAACGCHRNFHRREP  + P T T
Sbjct: 90  ECLKNHAANLGGHALDGCGEFMTSPTATPTDPTSLKCAACGCHRNFHRREP-EEPPLTTT 148

Query: 183 HFIDF---HR-----PHXXXXXXXXXXXXXXXXXXNYAYGRHLLLSLSTATDQNHTVTTP 338
           H I++   HR     P                    Y    H+LL+LS A  +N  V  P
Sbjct: 149 HVIEYQPHHRHQPLPPPPFSHRSPNSSSPPPISSSYYPSAPHMLLALSAALPEN--VAAP 206

Query: 339 GTPMPIKIENSSGRKRFRTKFSQDQK 416
              M +   +++ RKRFRTKF+QDQK
Sbjct: 207 NQTMLMNSHSNNSRKRFRTKFTQDQK 232


>ref|XP_002324056.1| predicted protein [Populus trichocarpa] gi|222867058|gb|EEF04189.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  112 bits (281), Expect = 2e-23
 Identities = 67/150 (44%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
 Frame = +3

Query: 3   ECLKNHAASIGGHALDGCGEFMXXXXXXXXXXXXLKCAACGCHRNFHRREPTNDFPATRT 182
           ECLKNHAA+IGGHALDGCGEFM            LKCAACGCHRNFHRREP +  P T T
Sbjct: 46  ECLKNHAATIGGHALDGCGEFMPSPIATHTNPTSLKCAACGCHRNFHRREPEDSPPHTAT 105

Query: 183 ----HFIDFHRPHXXXXXXXXXXXXXXXXXXN--------YAYGRHLLLSLSTATDQNHT 326
                +   HR H                  +        Y  G H+LL+LS      + 
Sbjct: 106 TTTIQYQSHHRHHPLPPPQAQPLHNGSPNSASPPPISSSYYPSGPHMLLALSGGVSGLNE 165

Query: 327 VTTPGTPMPIKIENSSGRKRFRTKFSQDQK 416
                 P P+    SS RKRFRTKFSQ QK
Sbjct: 166 NANINVPPPV---GSSPRKRFRTKFSQSQK 192


>ref|XP_002283533.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 341

 Score =  112 bits (279), Expect = 4e-23
 Identities = 67/145 (46%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
 Frame = +3

Query: 3   ECLKNHAASIGGHALDGCGEFMXXXXXXXXXXXXLKCAACGCHRNFHRREPTNDFPATRT 182
           ECLKNHAAS+GGHALDGCGEFM            LKCAACGCHRNFHRREP  D P   T
Sbjct: 75  ECLKNHAASLGGHALDGCGEFMPSPTATSADPTSLKCAACGCHRNFHRREP--DDPPPTT 132

Query: 183 HFIDF---HR----PHXXXXXXXXXXXXXXXXXXNYAYGRHLLLSLSTATDQNHTVTTPG 341
           H I++   HR    P                    Y    H+LL+LS           P 
Sbjct: 133 HVIEYQPHHRHQPPPPPPRPRSPNSPSPPPISSSYYPSAPHMLLALSAGISGPPENAPPI 192

Query: 342 TPMPIKIENSSGRKRFRTKFSQDQK 416
           +  P     ++GRKRFRTKFSQ QK
Sbjct: 193 SSSP--ASGANGRKRFRTKFSQGQK 215


Top