BLASTX nr result

ID: Atractylodes22_contig00033897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033897
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155787.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   168   1e-39
ref|XP_004133919.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   168   1e-39
gb|ADB24771.1| UDP-D-glucuronic acid 4-epimerase [Gossypium hirs...   158   1e-36
ref|XP_002892033.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis...   153   5e-35
ref|NP_171702.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis th...   152   9e-35

>ref|XP_004155787.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Cucumis sativus]
          Length = 432

 Score =  168 bits (426), Expect = 1e-39
 Identities = 88/124 (70%), Positives = 92/124 (74%)
 Frame = -2

Query: 372 SHMDNIPSTPGKFKMDKSPYIHRFRWHYSSLAKLTFWSXXXXXXXXXXXFKXXXXXXXXX 193
           SH+DNIPSTPGKFKMDKSPYIHR RWH SSL KLTFWS           F+         
Sbjct: 2   SHLDNIPSTPGKFKMDKSPYIHRLRWH-SSLTKLTFWSLVILGSILIFFFRSPSSSPLPS 60

Query: 192 XXSDLSRRSLKTSSWGGPTWEKRVRSSARIRSRNGLSVLVTGAAGFVGTHVSAALKRRGD 13
              D SRRSL T  WGGP WEKRVRSSAR+RSRNG+SVLVTGAAGFVGTHVS ALKRRGD
Sbjct: 61  ---DHSRRSLSTYDWGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALKRRGD 117

Query: 12  GVLG 1
           GVLG
Sbjct: 118 GVLG 121


>ref|XP_004133919.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Cucumis sativus]
          Length = 438

 Score =  168 bits (426), Expect = 1e-39
 Identities = 88/124 (70%), Positives = 92/124 (74%)
 Frame = -2

Query: 372 SHMDNIPSTPGKFKMDKSPYIHRFRWHYSSLAKLTFWSXXXXXXXXXXXFKXXXXXXXXX 193
           SH+DNIPSTPGKFKMDKSPYIHR RWH SSL KLTFWS           F+         
Sbjct: 8   SHLDNIPSTPGKFKMDKSPYIHRLRWH-SSLTKLTFWSLVILGSILIFFFRSPSSSPLPS 66

Query: 192 XXSDLSRRSLKTSSWGGPTWEKRVRSSARIRSRNGLSVLVTGAAGFVGTHVSAALKRRGD 13
              D SRRSL T  WGGP WEKRVRSSAR+RSRNG+SVLVTGAAGFVGTHVS ALKRRGD
Sbjct: 67  ---DHSRRSLSTYDWGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALKRRGD 123

Query: 12  GVLG 1
           GVLG
Sbjct: 124 GVLG 127


>gb|ADB24771.1| UDP-D-glucuronic acid 4-epimerase [Gossypium hirsutum]
          Length = 435

 Score =  158 bits (400), Expect = 1e-36
 Identities = 84/126 (66%), Positives = 95/126 (75%), Gaps = 2/126 (1%)
 Frame = -2

Query: 372 SHMDNIPSTPGKFKMDKSPYIH-RFRWHY-SSLAKLTFWSXXXXXXXXXXXFKXXXXXXX 199
           SH+D+IPSTPGKFKM+KSP+IH R RWH+ SSLAKLTFWS           F+       
Sbjct: 2   SHLDDIPSTPGKFKMEKSPFIHSRMRWHWQSSLAKLTFWSIVFFCLILIFFFRSPSSNPL 61

Query: 198 XXXXSDLSRRSLKTSSWGGPTWEKRVRSSARIRSRNGLSVLVTGAAGFVGTHVSAALKRR 19
                D  RRSL+T +WGGP WEKRVRSSAR+RSRNG SVLVTGAAGFVGTHVS+ALK+R
Sbjct: 62  LQ---DPYRRSLRTYNWGGPAWEKRVRSSARVRSRNGFSVLVTGAAGFVGTHVSSALKKR 118

Query: 18  GDGVLG 1
           GDGVLG
Sbjct: 119 GDGVLG 124


>ref|XP_002892033.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297337875|gb|EFH68292.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score =  153 bits (386), Expect = 5e-35
 Identities = 84/126 (66%), Positives = 94/126 (74%), Gaps = 2/126 (1%)
 Frame = -2

Query: 372 SHMDN-IPSTPGKFKMDKSPY-IHRFRWHYSSLAKLTFWSXXXXXXXXXXXFKXXXXXXX 199
           SH+D+ IPSTPGKFKMDKSPY +HR RW  SS+AKL FWS           ++       
Sbjct: 2   SHLDDDIPSTPGKFKMDKSPYFLHRTRWQ-SSVAKLAFWSLVFFGLLFIFFYRSPISNP- 59

Query: 198 XXXXSDLSRRSLKTSSWGGPTWEKRVRSSARIRSRNGLSVLVTGAAGFVGTHVSAALKRR 19
                D SRRSL+T SWGGP WEKRVRSSAR+R+RNG+SVLVTGAAGFVGTHVSAALKRR
Sbjct: 60  -----DSSRRSLRTYSWGGPHWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRR 114

Query: 18  GDGVLG 1
           GDGVLG
Sbjct: 115 GDGVLG 120


>ref|NP_171702.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis thaliana]
           gi|75264107|sp|Q9LPC1.1|GAE2_ARATH RecName:
           Full=UDP-glucuronate 4-epimerase 2; AltName:
           Full=UDP-glucuronic acid epimerase 2
           gi|8570451|gb|AAF76478.1|AC020622_12 Contains similarity
           to CAPI protein from Staphylococcus aureus gi|P39858 and
           contains a NAD dependent epimerase/dehydratase PF|01370
           domain. ESTs gb|N97076, gb|AI997010 come from this gene
           [Arabidopsis thaliana]
           gi|12248041|gb|AAG50112.1|AF334734_1 putative nucleotide
           sugar epimerase [Arabidopsis thaliana]
           gi|332189243|gb|AEE27364.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis thaliana]
          Length = 434

 Score =  152 bits (384), Expect = 9e-35
 Identities = 83/126 (65%), Positives = 94/126 (74%), Gaps = 2/126 (1%)
 Frame = -2

Query: 372 SHMDNIPSTPGKFKM-DKSPY-IHRFRWHYSSLAKLTFWSXXXXXXXXXXXFKXXXXXXX 199
           SH+D+IPSTPGKFKM DKSP+ +HR RW  SS+AKL FWS           ++       
Sbjct: 2   SHLDDIPSTPGKFKMMDKSPFFLHRTRWQ-SSVAKLAFWSLVFFGLLFIFFYRSPISNP- 59

Query: 198 XXXXSDLSRRSLKTSSWGGPTWEKRVRSSARIRSRNGLSVLVTGAAGFVGTHVSAALKRR 19
                D SRRSL+T SWGGP WEKRVRSSAR+R+RNG+SVLVTGAAGFVGTHVSAALKRR
Sbjct: 60  -----DSSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRR 114

Query: 18  GDGVLG 1
           GDGVLG
Sbjct: 115 GDGVLG 120


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