BLASTX nr result

ID: Atractylodes22_contig00033860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033860
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298107.1| peptide deformylase [Populus trichocarpa] gi...   133   1e-29
ref|XP_004156807.1| PREDICTED: peptide deformylase 1A, chloropla...   132   2e-29
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   132   2e-29
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo...   132   2e-29
ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solan...   132   4e-29

>ref|XP_002298107.1| peptide deformylase [Populus trichocarpa]
           gi|222845365|gb|EEE82912.1| peptide deformylase [Populus
           trichocarpa]
          Length = 299

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/80 (78%), Positives = 70/80 (87%)
 Frame = +1

Query: 1   SVDGYRAMVERFLEVEVRGLDRDGKGMKVDACGWQARILQHECDHLEGTLYVDKMVKRTF 180
           SVDG+RA+VER L+VEV GL RDG+ +KVDA GWQARILQHECDHLEGTLYVDKMV RTF
Sbjct: 220 SVDGFRAIVERHLDVEVIGLSRDGQPIKVDASGWQARILQHECDHLEGTLYVDKMVPRTF 279

Query: 181 RTIENLDLPLANSCPKQGVR 240
           RT+ENLDLPLA  CP+ G R
Sbjct: 280 RTVENLDLPLAEGCPEPGSR 299


>ref|XP_004156807.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 2
           [Cucumis sativus]
          Length = 237

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/80 (77%), Positives = 68/80 (85%)
 Frame = +1

Query: 1   SVDGYRAMVERFLEVEVRGLDRDGKGMKVDACGWQARILQHECDHLEGTLYVDKMVKRTF 180
           SVDG+RA+VER+L+VEV G DRDG  +KVDA GWQARILQHECDHL+GTLYVDKMV RTF
Sbjct: 158 SVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTF 217

Query: 181 RTIENLDLPLANSCPKQGVR 240
           RT ENL LPLA  CPK G R
Sbjct: 218 RTTENLTLPLAEGCPKLGAR 237


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/80 (77%), Positives = 68/80 (85%)
 Frame = +1

Query: 1   SVDGYRAMVERFLEVEVRGLDRDGKGMKVDACGWQARILQHECDHLEGTLYVDKMVKRTF 180
           SVDG+RA+VER+L+VEV G DRDG  +KVDA GWQARILQHECDHL+GTLYVDKMV RTF
Sbjct: 188 SVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTF 247

Query: 181 RTIENLDLPLANSCPKQGVR 240
           RT ENL LPLA  CPK G R
Sbjct: 248 RTTENLTLPLAEGCPKLGAR 267


>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/80 (77%), Positives = 68/80 (85%)
 Frame = +1

Query: 1   SVDGYRAMVERFLEVEVRGLDRDGKGMKVDACGWQARILQHECDHLEGTLYVDKMVKRTF 180
           SVDG+RA+VER+L+VEV G DRDG  +KVDA GWQARILQHECDHL+GTLYVDKMV RTF
Sbjct: 188 SVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTF 247

Query: 181 RTIENLDLPLANSCPKQGVR 240
           RT ENL LPLA  CPK G R
Sbjct: 248 RTTENLTLPLAEGCPKLGAR 267


>ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solanum lycopersicum]
           gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName:
           Full=Peptide deformylase 1A, chloroplastic; Short=PDF
           1A; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320968|gb|AAG33981.1|AF271258_1 peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 277

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/79 (79%), Positives = 69/79 (87%)
 Frame = +1

Query: 1   SVDGYRAMVERFLEVEVRGLDRDGKGMKVDACGWQARILQHECDHLEGTLYVDKMVKRTF 180
           SVDG+RA+VER LEVEV GLDR+GK +KVDA GWQARILQHE DHL+GTLYVDKM  RTF
Sbjct: 198 SVDGFRAVVERHLEVEVTGLDRNGKAIKVDASGWQARILQHEYDHLDGTLYVDKMAPRTF 257

Query: 181 RTIENLDLPLANSCPKQGV 237
           RT+ENLDLPLA  CPK GV
Sbjct: 258 RTVENLDLPLAAGCPKLGV 276


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