BLASTX nr result

ID: Atractylodes22_contig00033850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033850
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    68   7e-10
ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A...    67   1e-09
ref|XP_004174134.1| PREDICTED: uncharacterized protein LOC101232...    67   2e-09
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            66   3e-09

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +3

Query: 3    KAHGGLGIKSLRS*NNALISKHLWNITAKKESLWVKWVNTYRLKGRNFWEVNE-VYDAPW 179
            K  GGLG++SL+  N+    K +W I +   SLWVKWV+ + L+  +FWEV + V    W
Sbjct: 869  KDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSW 928

Query: 180  SWRSMVRIRGQFRNHIWHEVGNG 248
             W+ +++ R   +     EVGNG
Sbjct: 929  IWKKLLKYREVAKTLSKVEVGNG 951


>ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 288

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/79 (43%), Positives = 45/79 (56%)
 Frame = +3

Query: 12  GGLGIKSLRS*NNALISKHLWNITAKKESLWVKWVNTYRLKGRNFWEVNEVYDAPWSWRS 191
           GGL I+   S N A   K LW +  K  SLWV WV  Y LKGR+ WE++      W +R+
Sbjct: 20  GGLAIRDGSSWNIASTLKILWLLLVKSCSLWVAWVEAYILKGRSLWEIDVGVGRSWCFRA 79

Query: 192 MVRIRGQFRNHIWHEVGNG 248
           ++R R   + H+  EVGNG
Sbjct: 80  ILRKRDILKAHVKMEVGNG 98


>ref|XP_004174134.1| PREDICTED: uncharacterized protein LOC101232257, partial [Cucumis
           sativus]
          Length = 297

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/79 (41%), Positives = 45/79 (56%)
 Frame = +3

Query: 12  GGLGIKSLRS*NNALISKHLWNITAKKESLWVKWVNTYRLKGRNFWEVNEVYDAPWSWRS 191
           GGL I+   S N A   K LW +  K  SLWV WV +Y LKGR+ WE++      W +R 
Sbjct: 88  GGLDIRDGSSWNIASTLKILWLLLVKSGSLWVAWVESYILKGRSLWEIDAGVGRSWCFRE 147

Query: 192 MVRIRGQFRNHIWHEVGNG 248
           ++R +   + H+  EVGNG
Sbjct: 148 ILRKQDILKAHVKMEVGNG 166


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +3

Query: 3   KAHGGLGIKSLRS*NNALISKHLWNITAKKE-SLWVKWVNTYRLKGRNFWEVNEVYDAPW 179
           K  GGLGIKS++  N   + KH+WN+    + S+W  W+ +  L+GRNFW +    +  W
Sbjct: 156 KKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSW 215

Query: 180 SWRSMVRIRGQFRNHIWHEVGNG 248
           +W  ++++R      + + +G+G
Sbjct: 216 AWGKILKLRSLAWPKMKYIIGDG 238


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +3

Query: 3   KAHGGLGIKSLRS*NNALISKHLWNITAKKESLWVKWVNTYRLKGRNFWEVNEVYDAPWS 182
           K+ GGLG +S    N  L+ + +W +  +  SLW +W   +RL   +FW+VN +   PW+
Sbjct: 722 KSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWT 781

Query: 183 WRSMVRIRGQFRNHIWHEVGNG 248
           W+ ++ +R      I  +VGNG
Sbjct: 782 WKMLLNLRPLAEKFIKAKVGNG 803


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