BLASTX nr result

ID: Atractylodes22_contig00033840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033840
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat...   196   2e-48
ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat...   196   2e-48
ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat...   183   1e-44
emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]   183   1e-44

>ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  196 bits (497), Expect = 2e-48
 Identities = 94/160 (58%), Positives = 119/160 (74%)
 Frame = +3

Query: 3   LLSFFKWLSTQPPFRHTIQSYFTMIKFLSANQMFPQAESLLRFLVSRKGKHSAASVFQAF 182
           L SFF WLS+ P FRHT QSY  M  FLSA+QMF + +S++RFLVSRKGK SAASVF A 
Sbjct: 84  LFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAI 143

Query: 183 FETKGTKHNDFVFNSLVNCYVDDGFISDAIQCFRLAKEQNYRVPFQSCGRVLDYLMKSNS 362
            +T GT+ ++FVF++L+  Y D GF+SDAIQCFRL +  N+++PF  CG +LD ++ SNS
Sbjct: 144 LDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNS 203

Query: 363 NVTSWGFYLEILGCGYPPNVYTFNNLMHKFSKEGMIRDAK 482
            VT W FY EIL  G+PP V  +N L++KF KEG IRDAK
Sbjct: 204 PVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAK 243


>ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  196 bits (497), Expect = 2e-48
 Identities = 94/160 (58%), Positives = 119/160 (74%)
 Frame = +3

Query: 3   LLSFFKWLSTQPPFRHTIQSYFTMIKFLSANQMFPQAESLLRFLVSRKGKHSAASVFQAF 182
           L SFF WLS+ P FRHT QSY  M  FLSA+QMF + +S++RFLVSRKGK SAASVF A 
Sbjct: 84  LFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAI 143

Query: 183 FETKGTKHNDFVFNSLVNCYVDDGFISDAIQCFRLAKEQNYRVPFQSCGRVLDYLMKSNS 362
            +T GT+ ++FVF++L+  Y D GF+SDAIQCFRL +  N+++PF  CG +LD ++ SNS
Sbjct: 144 LDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNS 203

Query: 363 NVTSWGFYLEILGCGYPPNVYTFNNLMHKFSKEGMIRDAK 482
            VT W FY EIL  G+PP V  +N L++KF KEG IRDAK
Sbjct: 204 PVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAK 243


>ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|222844664|gb|EEE82211.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/160 (55%), Positives = 121/160 (75%)
 Frame = +3

Query: 3   LLSFFKWLSTQPPFRHTIQSYFTMIKFLSANQMFPQAESLLRFLVSRKGKHSAASVFQAF 182
           LLSFF +LS+ P F HT+QSY +M+ FL A++M  QAESLL F+VSRKGK SA+SVF + 
Sbjct: 93  LLSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASI 152

Query: 183 FETKGTKHNDFVFNSLVNCYVDDGFISDAIQCFRLAKEQNYRVPFQSCGRVLDYLMKSNS 362
            ETKGT  + FVF++L++ Y + G++SDAIQCFRL K+ N ++PF  C  +L+ ++K +S
Sbjct: 153 LETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSS 212

Query: 363 NVTSWGFYLEILGCGYPPNVYTFNNLMHKFSKEGMIRDAK 482
            + +  FYLEIL  GYPPNVYTFN LM++  KEG ++DA+
Sbjct: 213 PMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQ 252


>ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera] gi|296087085|emb|CBI33459.3|
           unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/160 (55%), Positives = 114/160 (71%)
 Frame = +3

Query: 3   LLSFFKWLSTQPPFRHTIQSYFTMIKFLSANQMFPQAESLLRFLVSRKGKHSAASVFQAF 182
           LLSFFKWLSTQ  FR +I SY TM  FL  ++M  +A+SLL+F+VSRKGK+SA+SVF + 
Sbjct: 86  LLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSV 145

Query: 183 FETKGTKHNDFVFNSLVNCYVDDGFISDAIQCFRLAKEQNYRVPFQSCGRVLDYLMKSNS 362
            E +GT  ++ VF+ L+N Y D G+ SDAIQCFRL ++ N ++PF SCG + D LMK N 
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 363 NVTSWGFYLEILGCGYPPNVYTFNNLMHKFSKEGMIRDAK 482
              +W FY EIL CGYPP+V  FN LMH+  KE  I +A+
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQ 245


>emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/160 (55%), Positives = 114/160 (71%)
 Frame = +3

Query: 3   LLSFFKWLSTQPPFRHTIQSYFTMIKFLSANQMFPQAESLLRFLVSRKGKHSAASVFQAF 182
           LLSFFKWLSTQ  FR +I SY TM  FL  ++M  +A+SLL+F+VSRKGK+SA+SVF + 
Sbjct: 86  LLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSV 145

Query: 183 FETKGTKHNDFVFNSLVNCYVDDGFISDAIQCFRLAKEQNYRVPFQSCGRVLDYLMKSNS 362
            E +GT  ++ VF+ L+N Y D G+ SDAIQCFRL ++ N ++PF SCG + D LMK N 
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 363 NVTSWGFYLEILGCGYPPNVYTFNNLMHKFSKEGMIRDAK 482
              +W FY EIL CGYPP+V  FN LMH+  KE  I +A+
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQ 245


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