BLASTX nr result

ID: Atractylodes22_contig00033837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033837
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529947.1| double-stranded RNA binding protein, putativ...   265   5e-69
ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486...   260   2e-67
ref|XP_002879100.1| dsRNA-binding protein 2 [Arabidopsis lyrata ...   259   4e-67
ref|NP_565672.1| dsRNA-binding protein 2 [Arabidopsis thaliana] ...   259   4e-67
ref|XP_003541993.1| PREDICTED: double-stranded RNA-binding prote...   257   2e-66

>ref|XP_002529947.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223530577|gb|EEF32455.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 464

 Score =  265 bits (678), Expect = 5e-69
 Identities = 146/224 (65%), Positives = 156/224 (69%), Gaps = 4/224 (1%)
 Frame = -2

Query: 673 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAVVNFNGDSFESPNYFSTLRQXXXXX 494
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNG+ FE P+Y STLRQ     
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPHYCSTLRQAEHSA 60

Query: 493 XXXXXXXXXXXXXXA----RILDETGVYKNLLQEISQRVGAPLPRYTTYRSGLGHLPVFT 326
                              RILDETGVYKNLLQEI+QRVGAPLP+YTT+RSGLGH PVFT
Sbjct: 61  AEVALTSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHQPVFT 120

Query: 325 GMVELAGITFTGEPAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWSSLKQLAKQDASS 146
           G VELAGITFTGEPAK                             AWSSLKQLAK+DASS
Sbjct: 121 GTVELAGITFTGEPAK-----------------NKKQAEKNAAMAAWSSLKQLAKEDASS 163

Query: 145 SSEPVNSDEQEQIRIARALLNYRLKQKIGTASYSDLPIPFQKKF 14
           SSEP NSDE EQI IARALLNYRLK+K+  A+  + PIPF KKF
Sbjct: 164 SSEPENSDELEQITIARALLNYRLKEKMAIANSPNSPIPFSKKF 207


>ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486298|gb|AES67501.1|
           Ribonuclease [Medicago truncatula]
          Length = 408

 Score =  260 bits (664), Expect = 2e-67
 Identities = 145/224 (64%), Positives = 158/224 (70%), Gaps = 4/224 (1%)
 Frame = -2

Query: 673 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAVVNFNGDSFESPNYFSTLRQXXXXX 494
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNG+ FESP+Y STLRQ     
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 493 XXXXXXXXXXXXXXA----RILDETGVYKNLLQEISQRVGAPLPRYTTYRSGLGHLPVFT 326
                              +ILDETGVYKNLLQEI+QRVGAPLP+YTTYRSGLGHLPVFT
Sbjct: 61  AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFT 120

Query: 325 GMVELAGITFTGEPAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWSSLKQLAKQDASS 146
           G+VELAGITFTGEPAK                             AWSSLKQLAK+ ASS
Sbjct: 121 GIVELAGITFTGEPAK-----------------NKKQAEKNAAMAAWSSLKQLAKETASS 163

Query: 145 SSEPVNSDEQEQIRIARALLNYRLKQKIGTASYSDLPIPFQKKF 14
           S+EP N+DE EQI IARALLNYRLK+K+ + S  +  IPFQKKF
Sbjct: 164 STEPENNDELEQITIARALLNYRLKEKM-SMSNPNARIPFQKKF 206


>ref|XP_002879100.1| dsRNA-binding protein 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297324939|gb|EFH55359.1| dsRNA-binding protein 2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score =  259 bits (662), Expect = 4e-67
 Identities = 141/224 (62%), Positives = 152/224 (67%), Gaps = 4/224 (1%)
 Frame = -2

Query: 673 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAVVNFNGDSFESPNYFSTLRQXXXXX 494
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNG+ FESP Y STLRQ     
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 493 XXXXXXXXXXXXXXA----RILDETGVYKNLLQEISQRVGAPLPRYTTYRSGLGHLPVFT 326
                              RILDETGVYKNLLQEI+QRVGAPLPRYTT+RSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLASRILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 325 GMVELAGITFTGEPAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWSSLKQLAKQDASS 146
           G VELAGITFTG+PAK                             AWSSLKQLAK+ +SS
Sbjct: 121 GTVELAGITFTGDPAK-----------------NKKQAEKNAAMAAWSSLKQLAKETSSS 163

Query: 145 SSEPVNSDEQEQIRIARALLNYRLKQKIGTASYSDLPIPFQKKF 14
             EP N DE EQ+ IARAL+NYR+K+ IGT S S  P+PF KKF
Sbjct: 164 MPEPENIDELEQVIIARALINYRIKENIGTGSSSSAPVPFAKKF 207


>ref|NP_565672.1| dsRNA-binding protein 2 [Arabidopsis thaliana]
           gi|75266001|sp|Q9SKN2.1|DRB2_ARATH RecName:
           Full=Double-stranded RNA-binding protein 2; AltName:
           Full=dsRNA-binding protein 2; Short=AtDRB2
           gi|4432839|gb|AAD20688.1| expressed protein [Arabidopsis
           thaliana] gi|14334606|gb|AAK59481.1| unknown protein
           [Arabidopsis thaliana] gi|17065634|gb|AAL33811.1|
           unknown protein [Arabidopsis thaliana]
           gi|330253020|gb|AEC08114.1| dsRNA-binding protein 2
           [Arabidopsis thaliana]
          Length = 434

 Score =  259 bits (662), Expect = 4e-67
 Identities = 141/224 (62%), Positives = 152/224 (67%), Gaps = 4/224 (1%)
 Frame = -2

Query: 673 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAVVNFNGDSFESPNYFSTLRQXXXXX 494
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNG+ FESP Y STLRQ     
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 493 XXXXXXXXXXXXXXA----RILDETGVYKNLLQEISQRVGAPLPRYTTYRSGLGHLPVFT 326
                              RILDETGVYKNLLQEI+QRVGAPLPRYTT+RSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 325 GMVELAGITFTGEPAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWSSLKQLAKQDASS 146
           G VELAGITFTG+PAK                             AWSSLKQLAK+ +SS
Sbjct: 121 GTVELAGITFTGDPAK-----------------NKKQAEKNAAMAAWSSLKQLAKETSSS 163

Query: 145 SSEPVNSDEQEQIRIARALLNYRLKQKIGTASYSDLPIPFQKKF 14
             EP N DE EQ+ IARAL+NYR+K+ IGT S S  P+PF KKF
Sbjct: 164 MPEPENIDELEQVIIARALINYRIKENIGTGSSSSAPVPFAKKF 207


>ref|XP_003541993.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 393

 Score =  257 bits (656), Expect = 2e-66
 Identities = 141/224 (62%), Positives = 157/224 (70%), Gaps = 4/224 (1%)
 Frame = -2

Query: 673 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAVVNFNGDSFESPNYFSTLRQXXXXX 494
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNG+ FE+P+Y STLRQ     
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFETPHYCSTLRQAEHSA 60

Query: 493 XXXXXXXXXXXXXXA----RILDETGVYKNLLQEISQRVGAPLPRYTTYRSGLGHLPVFT 326
                              +ILDETGVYKNLLQEI+QRVGAPLP YTTYRSGLGHLPVFT
Sbjct: 61  AEAALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPHYTTYRSGLGHLPVFT 120

Query: 325 GMVELAGITFTGEPAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWSSLKQLAKQDASS 146
           G+VELAGITFTGEPAK                             AWS+LKQLAK+ ASS
Sbjct: 121 GIVELAGITFTGEPAK-----------------NKKQAEKNAAMAAWSALKQLAKETASS 163

Query: 145 SSEPVNSDEQEQIRIARALLNYRLKQKIGTASYSDLPIPFQKKF 14
           S+EP N+DE EQI IARALLNYRLK+K+ T S  + P+PF ++F
Sbjct: 164 STEPENNDEVEQITIARALLNYRLKEKM-TMSNPNAPLPFHERF 206


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