BLASTX nr result

ID: Atractylodes22_contig00033814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033814
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]   166   1e-39
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...   163   1e-38
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   162   3e-38
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   162   3e-38
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   156   1e-36

>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score =  166 bits (421), Expect = 1e-39
 Identities = 82/148 (55%), Positives = 104/148 (70%), Gaps = 2/148 (1%)
 Frame = -2

Query: 438 FCAFVDDYSRYMWLYPMIRKSDIVELFKQFVMD-ERQFKYKVKTVQTD-WGEYRSFANFF 265
           F  FVDDYSRY WLY +  K   + +FKQF +  E QF  K+K +Q+D  GE+RSF +F 
Sbjct: 513 FILFVDDYSRYTWLYLLQSKDQALPIFKQFKLQVENQFDAKIKCLQSDNGGEFRSFMSFL 572

Query: 264 STMGIVHRLSCPHTHEQNGFVERRNRYVIETSLTLLAQGNVPHRFWHYAFDTATFLINRM 85
              GI+HR SCP+   QNG VER++R+V+ET L LLA   +P +FW YAF TATFLINRM
Sbjct: 573 QESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRM 632

Query: 84  PSRVSQSLSPYKHLFHKPPDHLFLKVFG 1
           PS+V Q+ SPY  LF + PD+ FL+VFG
Sbjct: 633 PSKVLQNASPYFALFKRNPDYKFLRVFG 660


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1145

 Score =  163 bits (413), Expect = 1e-38
 Identities = 73/148 (49%), Positives = 109/148 (73%), Gaps = 2/148 (1%)
 Frame = -2

Query: 438 FCAFVDDYSRYMWLYPMIRKSDIVELFKQF-VMDERQFKYKVKTVQTDWG-EYRSFANFF 265
           + +F+DD+S++ W+Y +  KS + E F++F VM ER F  K+  +QTDWG EYR+  +FF
Sbjct: 406 YVSFIDDFSKFTWIYLLQHKSQVFEKFQEFQVMIERLFDRKILAMQTDWGGEYRALNSFF 465

Query: 264 STMGIVHRLSCPHTHEQNGFVERRNRYVIETSLTLLAQGNVPHRFWHYAFDTATFLINRM 85
           S +GIVH +SCPHTH+QNG  ER++R+++E  L+LL+  ++P +FW  AF  AT+LINR+
Sbjct: 466 SKIGIVHHVSCPHTHQQNGSAERKHRHIVEVGLSLLSHAHMPLKFWDEAFQAATYLINRV 525

Query: 84  PSRVSQSLSPYKHLFHKPPDHLFLKVFG 1
           PSRV Q+ +P +  FH+ PD+  L+VFG
Sbjct: 526 PSRVIQNTTPLEKFFHQKPDYSSLRVFG 553


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score =  162 bits (409), Expect = 3e-38
 Identities = 72/148 (48%), Positives = 110/148 (74%), Gaps = 2/148 (1%)
 Frame = -2

Query: 438 FCAFVDDYSRYMWLYPMIRKSDIVELFKQF-VMDERQFKYKVKTVQTDWG-EYRSFANFF 265
           + +F+DD+S++ W+Y +  KS + + F++F VM ERQF  K+  +QTDWG EY+S  +FF
Sbjct: 530 YVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFF 589

Query: 264 STMGIVHRLSCPHTHEQNGFVERRNRYVIETSLTLLAQGNVPHRFWHYAFDTATFLINRM 85
           S +GIVH +SCPHTH+QNG  ER++R+++E  L+LL+  ++P +FW  AF  AT+LINR+
Sbjct: 590 SKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRV 649

Query: 84  PSRVSQSLSPYKHLFHKPPDHLFLKVFG 1
           PSRV  ++SP + LF + PD+  L++FG
Sbjct: 650 PSRVIHNISPLEKLFKQKPDYSSLRIFG 677


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/148 (54%), Positives = 102/148 (68%), Gaps = 2/148 (1%)
 Frame = -2

Query: 438  FCAFVDDYSRYMWLYPMIRKSDIVELFKQFVMD-ERQFKYKVKTVQTD-WGEYRSFANFF 265
            F  FVDDYSRY WLY +  K   + +FK F +  E QF+ K+K +Q D  GE+RSF +F 
Sbjct: 563  FILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEAKIKCLQXDNGGEFRSFMSFL 622

Query: 264  STMGIVHRLSCPHTHEQNGFVERRNRYVIETSLTLLAQGNVPHRFWHYAFDTATFLINRM 85
               GI+HR SCP+   QNG VER++R+V+ET L LLA   +P +FW YAF TATFLINRM
Sbjct: 623  QESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRM 682

Query: 84   PSRVSQSLSPYKHLFHKPPDHLFLKVFG 1
            PS+V  + SPY  LF + PD+ FL+VFG
Sbjct: 683  PSKVLXNASPYFALFKRNPDYKFLRVFG 710


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/148 (50%), Positives = 100/148 (67%), Gaps = 2/148 (1%)
 Frame = -2

Query: 438  FCAFVDDYSRYMWLYPMIRKSDIVELFKQFVMD-ERQFKYKVKTVQTD-WGEYRSFANFF 265
            F  FVDDYSRY W Y +  K   + +FK F +  E QF  K+K +Q+D  GE+RSF +F 
Sbjct: 568  FILFVDDYSRYTWFYSLQTKDQALPIFKXFKLQMENQFDTKIKCLQSDNGGEFRSFTSFL 627

Query: 264  STMGIVHRLSCPHTHEQNGFVERRNRYVIETSLTLLAQGNVPHRFWHYAFDTATFLINRM 85
              +GI HR SCP+   QNG VER++R+V+ET L LL+  ++P ++WHYAF T TFLINRM
Sbjct: 628  QAVGIAHRFSCPYNSXQNGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINRM 687

Query: 84   PSRVSQSLSPYKHLFHKPPDHLFLKVFG 1
            PS+V +  SPY  LF + PD+   +VFG
Sbjct: 688  PSKVLEYDSPYFTLFRRHPDYKSFRVFG 715


Top