BLASTX nr result

ID: Atractylodes22_contig00033810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033810
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    59   5e-07
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]    59   5e-07
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g02650, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/54 (64%), Positives = 41/54 (75%)
 Frame = +3

Query: 117 KLDSVLSLLKRRDGDFDVASGSLESSLDDMNLNMSEEFVVRVLETPHVPGENLI 278
           KL+SVLSLL+   GD   A GSLESS + M L+++EEFVVRVLETP VP  NLI
Sbjct: 119 KLESVLSLLQS-SGD---AVGSLESSFNAMGLSLNEEFVVRVLETPFVPANNLI 168


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/54 (59%), Positives = 40/54 (74%)
 Frame = +3

Query: 117 KLDSVLSLLKRRDGDFDVASGSLESSLDDMNLNMSEEFVVRVLETPHVPGENLI 278
           KL++VL LL+  D       GSLES+LD  +L++ EEFVV+VLETPHV GENLI
Sbjct: 31  KLENVLHLLQSSD------DGSLESTLDTFSLDLHEEFVVKVLETPHVLGENLI 78


>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/54 (64%), Positives = 41/54 (75%)
 Frame = +3

Query: 117 KLDSVLSLLKRRDGDFDVASGSLESSLDDMNLNMSEEFVVRVLETPHVPGENLI 278
           KL+SVLSLL+   GD   A GSLESS + M L+++EEFVVRVLETP VP  NLI
Sbjct: 119 KLESVLSLLQS-SGD---AVGSLESSFNAMGLSLNEEFVVRVLETPFVPANNLI 168


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +3

Query: 117 KLDSVLSLLKRRDGDFDVASGSLESSLDDMNLNMSEEFVVRVLETPHVPGENLI 278
           +L+SVLSL++          GS ESSLD+M L ++E+FV++V+ETPH+ GENLI
Sbjct: 33  QLESVLSLIQ------STVDGSFESSLDEMRLTLNEDFVLKVIETPHILGENLI 80


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