BLASTX nr result

ID: Atractylodes22_contig00033793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033793
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16176.3| unnamed protein product [Vitis vinifera]              259   3e-67
ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat...   259   3e-67
ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat...   247   2e-63
ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|2...   245   8e-63
ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat...   226   5e-57

>emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  259 bits (663), Expect = 3e-67
 Identities = 123/207 (59%), Positives = 156/207 (75%)
 Frame = -1

Query: 621 VSTLTDIVRGNQSWSLSFNNTFVSHNLKPHHVEKVLLRTLDDPRLALRFFNFLGLHRNFG 442
           V+ LTDIVRGNQSW ++ NN+F+S  LKPHHVEKVL++TLDD RLALRFFNFLGLH+NF 
Sbjct: 31  VACLTDIVRGNQSWRVALNNSFISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFD 90

Query: 441 HSTTSFCILVHALVQSNLLWPAXXXXXXXXXXXSDPRIVFRHYYDTYVNCNFSTSTGFDL 262
           HSTTSFCIL+HALVQSNL WPA            +P  +F  + D+Y  CNFST+ GFDL
Sbjct: 91  HSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDL 150

Query: 261 LINAYVQGRRVLDSFLVVNLMKERNLMPEIRTVSDVFNGLIRIRRFDLVLRFFEEMAEMG 82
           LI  YVQ RR LD  +VV LM +  ++P+IRT+S V NGLIRIR+F + L  F+E+   G
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210

Query: 81  IRGNAYIHSAVIRCLCELKNFDRAKEM 1
           +R + Y+++AV+R LCELK+F RA+E+
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREV 237


>ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  259 bits (663), Expect = 3e-67
 Identities = 123/207 (59%), Positives = 156/207 (75%)
 Frame = -1

Query: 621 VSTLTDIVRGNQSWSLSFNNTFVSHNLKPHHVEKVLLRTLDDPRLALRFFNFLGLHRNFG 442
           V+ LTDIVRGNQSW ++ NN+F+S  LKPHHVEKVL++TLDD RLALRFFNFLGLH+NF 
Sbjct: 31  VACLTDIVRGNQSWRVALNNSFISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFD 90

Query: 441 HSTTSFCILVHALVQSNLLWPAXXXXXXXXXXXSDPRIVFRHYYDTYVNCNFSTSTGFDL 262
           HSTTSFCIL+HALVQSNL WPA            +P  +F  + D+Y  CNFST+ GFDL
Sbjct: 91  HSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDL 150

Query: 261 LINAYVQGRRVLDSFLVVNLMKERNLMPEIRTVSDVFNGLIRIRRFDLVLRFFEEMAEMG 82
           LI  YVQ RR LD  +VV LM +  ++P+IRT+S V NGLIRIR+F + L  F+E+   G
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210

Query: 81  IRGNAYIHSAVIRCLCELKNFDRAKEM 1
           +R + Y+++AV+R LCELK+F RA+E+
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREV 237


>ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
           gi|449501214|ref|XP_004161309.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  247 bits (630), Expect = 2e-63
 Identities = 112/207 (54%), Positives = 155/207 (74%)
 Frame = -1

Query: 621 VSTLTDIVRGNQSWSLSFNNTFVSHNLKPHHVEKVLLRTLDDPRLALRFFNFLGLHRNFG 442
           V  L  IVRGNQSW ++FNN+ +S N++PHHVEKVL+RTLDD RLALRFFNFLGLHRNF 
Sbjct: 41  VYVLEQIVRGNQSWKIAFNNSSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFH 100

Query: 441 HSTTSFCILVHALVQSNLLWPAXXXXXXXXXXXSDPRIVFRHYYDTYVNCNFSTSTGFDL 262
           HST SFCIL+H+L+Q+NL WPA            +P  +F +++++Y    FS+S+GFD+
Sbjct: 101 HSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDM 160

Query: 261 LINAYVQGRRVLDSFLVVNLMKERNLMPEIRTVSDVFNGLIRIRRFDLVLRFFEEMAEMG 82
           LI  YVQ +RV+D  LVVNLM++  L+PE+RT+S + N L RIR+F  VL  F+ +   G
Sbjct: 161 LIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAG 220

Query: 81  IRGNAYIHSAVIRCLCELKNFDRAKEM 1
           ++ + YI++ V++CLCELK+F++AKE+
Sbjct: 221 VKPDCYIYTVVVKCLCELKDFNKAKEI 247


>ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|222845629|gb|EEE83176.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  245 bits (625), Expect = 8e-63
 Identities = 130/250 (52%), Positives = 162/250 (64%), Gaps = 3/250 (1%)
 Frame = -1

Query: 741 KLHRSF--RSLPHPNPIISTTATPSYTTKXXXXXXXXXXXXLVSTLTDIVRGNQSWSLSF 568
           K HR    R + +P PI  T     Y T              ++TL +IVRG +SW ++F
Sbjct: 2   KFHRCHPHRLVLNPIPIFQTKPKHLYCTSAIQDNDVKDSQF-IATLRNIVRGKESWKIAF 60

Query: 567 NNTFVSHNLKPHHVEKVLLRTLDDPRLALRFFNFLGLHRNFGHSTTSFCILVHALVQSNL 388
           N+ F+S  LKPHHVEKVLL TLDD RLALRFFNFLGLH+NF HST SFCIL+HALV +NL
Sbjct: 61  NDPFISTKLKPHHVEKVLLLTLDDTRLALRFFNFLGLHKNFNHSTMSFCILIHALVNANL 120

Query: 387 LWPA-XXXXXXXXXXXSDPRIVFRHYYDTYVNCNFSTSTGFDLLINAYVQGRRVLDSFLV 211
            WPA             DPR VF    D +  C+F +S GFDLLI +YVQ +R+ DS L+
Sbjct: 121 FWPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLI 180

Query: 210 VNLMKERNLMPEIRTVSDVFNGLIRIRRFDLVLRFFEEMAEMGIRGNAYIHSAVIRCLCE 31
             LM++  LMP++RT+ +V NGL +IRR D+VL  F E+  MGIR + YI+ AVIR  CE
Sbjct: 181 FRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCE 240

Query: 30  LKNFDRAKEM 1
           LKNF +AKEM
Sbjct: 241 LKNFAKAKEM 250


>ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  226 bits (575), Expect = 5e-57
 Identities = 107/206 (51%), Positives = 143/206 (69%)
 Frame = -1

Query: 621 VSTLTDIVRGNQSWSLSFNNTFVSHNLKPHHVEKVLLRTLDDPRLALRFFNFLGLHRNFG 442
           VS L DIVRG QSW ++FN+  +S  L+PHHVE+VL+ TLDD +LALRFFNFLGLH+N  
Sbjct: 41  VSLLCDIVRGKQSWKVAFNDASISSTLRPHHVEQVLMNTLDDAKLALRFFNFLGLHKNMN 100

Query: 441 HSTTSFCILVHALVQSNLLWPAXXXXXXXXXXXSDPRIVFRHYYDTYVNCNFSTSTGFDL 262
           HSTTS+ I+VHALV S L WPA           S P+ VF H+ D+Y  C FS++ GF+L
Sbjct: 101 HSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNL 160

Query: 261 LINAYVQGRRVLDSFLVVNLMKERNLMPEIRTVSDVFNGLIRIRRFDLVLRFFEEMAEMG 82
           L+  YV   R+ D+ ++V LM   NL+PE+RT+S + NGL+++R+F  V   F+E    G
Sbjct: 161 LVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAG 220

Query: 81  IRGNAYIHSAVIRCLCELKNFDRAKE 4
           +R + Y  SAV+R +CELK+F RAKE
Sbjct: 221 VRPDPYTCSAVVRSMCELKDFLRAKE 246


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