BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033747
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   185   4e-45
ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              180   9e-44
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   177   1e-42
ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   175   4e-42

>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  185 bits (469), Expect = 4e-45
 Identities = 89/161 (55%), Positives = 120/161 (74%)
 Frame = +3

Query: 9   EQPIHEDIFRAGQKLGSFKVGDSTFYSLIENFAKTGDLISLEKVFKQMKRERRVFIERNF 188
           + PI + IF++  ++GS+K GDSTFYSLIEN+A +GD  +L +VF +MKRERRVFIE+NF
Sbjct: 43  DAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNF 102

Query: 189 ILVFXXXXXXXXXXXXLDLFDKMWVEYQCRPSVRSFNSVINVVIQEGLFDRALEFYSSVI 368
           ILVF            ++LF +M  E+QCR +VRSFNSV+NV+IQEGLF RALEFY   +
Sbjct: 103 ILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGV 162

Query: 369 IQDKRVLPNVLTHNLILKVLCRLGLIDRAIQIFREMPFRKC 491
                + PNVL+ NL++K +C+LGL+DRAI++FREM  +KC
Sbjct: 163 GGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKC 203



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/138 (25%), Positives = 70/138 (50%)
 Frame = +3

Query: 78  TFYSLIENFAKTGDLISLEKVFKQMKRERRVFIERNFILVFXXXXXXXXXXXXLDLFDKM 257
           T+ SLI+ F KTG+     +V+K+M +   V  E  + ++             + ++  M
Sbjct: 419 TYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHM 478

Query: 258 WVEYQCRPSVRSFNSVINVVIQEGLFDRALEFYSSVIIQDKRVLPNVLTHNLILKVLCRL 437
            +    RP V +++S+I+ +   G  +  L+ ++ ++ Q+    P+V+T+N++L+ LC+ 
Sbjct: 479 -LGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQ 537

Query: 438 GLIDRAIQIFREMPFRKC 491
             I  AI +   M  R C
Sbjct: 538 NSISHAIDLLNSMLDRGC 555


>ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  180 bits (457), Expect = 9e-44
 Identities = 83/156 (53%), Positives = 120/156 (76%), Gaps = 1/156 (0%)
 Frame = +3

Query: 27  DIFRAGQKLGSFKVGDSTFYSLIENFAKTGDLISLEKVFKQMKRERRVFIERNFILVFXX 206
           +IF++G ++GS+K+GD +FYSLIE+ A + D  SLE+V  QMKRERRVF+E+NFI++F  
Sbjct: 46  EIFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKA 105

Query: 207 XXXXXXXXXXLDLFDKMWVEYQCRPSVRSFNSVINVVIQEGLFDRALEFYSSVII-QDKR 383
                     +DLF +MW E+QC+ +V+SFNSV+NV++QEGLF+RALEFY+ V+  +   
Sbjct: 106 YGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLN 165

Query: 384 VLPNVLTHNLILKVLCRLGLIDRAIQIFREMPFRKC 491
           + PN LT NL++K +CRLGL+D+AI++FRE+P R C
Sbjct: 166 IHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNC 201


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  180 bits (457), Expect = 9e-44
 Identities = 87/154 (56%), Positives = 116/154 (75%)
 Frame = +3

Query: 30  IFRAGQKLGSFKVGDSTFYSLIENFAKTGDLISLEKVFKQMKRERRVFIERNFILVFXXX 209
           IF++  ++GS+K GDSTFYSLIEN+A +GD  +L +VF +MKRERRVFIE+NFILVF   
Sbjct: 66  IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 125

Query: 210 XXXXXXXXXLDLFDKMWVEYQCRPSVRSFNSVINVVIQEGLFDRALEFYSSVIIQDKRVL 389
                    ++LF +M  E+QCR +VRSFNSV+NV+IQEGLF RALEFY   +     + 
Sbjct: 126 GKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS 185

Query: 390 PNVLTHNLILKVLCRLGLIDRAIQIFREMPFRKC 491
           PNVL+ NL++K +C+LGL+DRAI++FREM  +KC
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKC 219



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/138 (25%), Positives = 70/138 (50%)
 Frame = +3

Query: 78  TFYSLIENFAKTGDLISLEKVFKQMKRERRVFIERNFILVFXXXXXXXXXXXXLDLFDKM 257
           T+ SLI+ F KTG+     +V+K+M +   V  E  + ++             + ++  M
Sbjct: 435 TYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHM 494

Query: 258 WVEYQCRPSVRSFNSVINVVIQEGLFDRALEFYSSVIIQDKRVLPNVLTHNLILKVLCRL 437
            +    RP V +++S+I+ +   G  +  L+ ++ ++ Q+    P+V+T+N++L+ LC+ 
Sbjct: 495 -LGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQ 553

Query: 438 GLIDRAIQIFREMPFRKC 491
             I  AI +   M  R C
Sbjct: 554 NSISHAIDLLNSMLDRGC 571


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
 Frame = +3

Query: 15  PIHEDIFRAGQKLGSFKVGDSTFYSLIENFAKTGDLISLEKVFKQMKRERRVFIERNFIL 194
           PI + IF +  K+GSFKVGDSTFYSLIEN+A + D  SLEKV  +M+ E RVF E++F +
Sbjct: 53  PISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFV 112

Query: 195 VFXXXXXXXXXXXXLDLFDKMWVEYQCRPSVRSFNSVINVVIQEGLFDRALEFYSSVI-I 371
           +F            ++LF +M  E+ C+P+V+SFNSV+NV+IQ G  DRALEFY+ V+  
Sbjct: 113 MFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGA 172

Query: 372 QDKRVLPNVLTHNLILKVLCRLGLIDRAIQIFREMPFRKC 491
           +D  +LPNVL+ NLI+K +C+LGL+D AI++FREMP RKC
Sbjct: 173 KDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKC 212



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/138 (24%), Positives = 67/138 (48%)
 Frame = +3

Query: 78  TFYSLIENFAKTGDLISLEKVFKQMKRERRVFIERNFILVFXXXXXXXXXXXXLDLFDKM 257
           TF SL++ F + G+     +V+K M +      E  + ++             + ++ KM
Sbjct: 428 TFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKM 487

Query: 258 WVEYQCRPSVRSFNSVINVVIQEGLFDRALEFYSSVIIQDKRVLPNVLTHNLILKVLCRL 437
            +   CRP V +++S+I  +   G  + AL+ Y+ ++  +    P+V+T+N++   LC+ 
Sbjct: 488 -LATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQ 546

Query: 438 GLIDRAIQIFREMPFRKC 491
             I RA+ +   M  R C
Sbjct: 547 SSISRAVDLLNSMLDRGC 564


>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/166 (51%), Positives = 122/166 (73%), Gaps = 3/166 (1%)
 Frame = +3

Query: 3   GIEQ--PIHEDIFRAGQKLGSFKVGDSTFYSLIENFAKTGDLISLEKVFKQMKRERRVFI 176
           GIE   PI + IF++G K+GS+K+GDSTFYSLI+N+A  GD  SLEKV  +M+ E+RV +
Sbjct: 35  GIEHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVV 94

Query: 177 ERNFILVFXXXXXXXXXXXXLDLFDKMWVEYQCRPSVRSFNSVINVVIQEGLFDRALEFY 356
           E+ F+++F            + LFD+M  E++C+ +V+SFNSV+NV+IQEGLF RALEFY
Sbjct: 95  EKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFY 154

Query: 357 SSVI-IQDKRVLPNVLTHNLILKVLCRLGLIDRAIQIFREMPFRKC 491
           + VI  +   + PNVLT NL++K +C++GL+D A+Q+FR+MP  KC
Sbjct: 155 NHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKC 200



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/73 (35%), Positives = 44/73 (60%)
 Frame = +3

Query: 273 CRPSVRSFNSVINVVIQEGLFDRALEFYSSVIIQDKRVLPNVLTHNLILKVLCRLGLIDR 452
           C+P V ++ S+IN +   GL + AL+ Y+ ++ Q+    P+V+T+N++L  LC+   I R
Sbjct: 480 CKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISR 539

Query: 453 AIQIFREMPFRKC 491
           AI +   M  R C
Sbjct: 540 AIDLLNSMLDRGC 552