BLASTX nr result

ID: Atractylodes22_contig00033725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033725
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138422.1| PREDICTED: DNA replication complex GINS prot...   144   7e-33
ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [M...   141   6e-32
gb|AFK34889.1| unknown [Medicago truncatula]                          139   2e-31
ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_002271201.1| PREDICTED: probable DNA replication complex ...   136   2e-30

>ref|XP_004138422.1| PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis
           sativus] gi|449519657|ref|XP_004166851.1| PREDICTED: DNA
           replication complex GINS protein PSF3-like [Cucumis
           sativus]
          Length = 189

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/107 (63%), Positives = 84/107 (78%)
 Frame = -3

Query: 321 MAQYYDIDDILADEELVPAVFLEAVNGVGLFESNDTDRVEPRSKVELPFWLARELHMRQA 142
           M  YYDIDDILA+EELV  VF +AVNGVG+  S++TD VE  SKVELPFWLA+ELH+RQ 
Sbjct: 5   MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 64

Query: 141 VSVSIPPCFNKKTREEIGADGAHVDLRTRCSYFYELGYKIVQLIGDK 1
             +++P CFN++TR EI AD A VDLR+RC +FYE G KI  L+GD+
Sbjct: 65  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDR 111


>ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [Medicago truncatula]
           gi|355489935|gb|AES71138.1| DNA replication complex GINS
           protein PSF3 [Medicago truncatula]
          Length = 186

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/108 (62%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
 Frame = -3

Query: 321 MAQYYDIDDILADEELVPAVFLEAVNGVGLFE-SNDTDRVEPRSKVELPFWLARELHMRQ 145
           MA YYD+DDIL +EE+V  +F +A +GVG+ + S++TD +E  SKVELPFWLA EL +RQ
Sbjct: 1   MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60

Query: 144 AVSVSIPPCFNKKTREEIGADGAHVDLRTRCSYFYELGYKIVQLIGDK 1
           AVSV++PPCFN+KTR EI AD A VDLR+RC YFYE G KI  ++GD+
Sbjct: 61  AVSVNVPPCFNQKTRLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDR 108


>gb|AFK34889.1| unknown [Medicago truncatula]
          Length = 186

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/108 (61%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
 Frame = -3

Query: 321 MAQYYDIDDILADEELVPAVFLEAVNGVGLFE-SNDTDRVEPRSKVELPFWLARELHMRQ 145
           MA YYD+DDIL +EE+V  +F +A +GVG+ + S++TD +E  SKVELPFWLA EL +RQ
Sbjct: 1   MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60

Query: 144 AVSVSIPPCFNKKTREEIGADGAHVDLRTRCSYFYELGYKIVQLIGDK 1
           AVSV++PPCFN+K R EI AD A VDLR+RC YFYE G KI  ++GD+
Sbjct: 61  AVSVNVPPCFNQKARLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDR 108


>ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|222865254|gb|EEF02385.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/103 (66%), Positives = 79/103 (76%)
 Frame = -3

Query: 321 MAQYYDIDDILADEELVPAVFLEAVNGVGLFESNDTDRVEPRSKVELPFWLARELHMRQA 142
           MA Y +IDDILA+EE VP VF +A+NGV + ES +   VE  SK ELPFWLARELHMRQA
Sbjct: 1   MANYNEIDDILAEEEFVPVVFQKAINGVKIDESTEKGHVEQGSKTELPFWLARELHMRQA 60

Query: 141 VSVSIPPCFNKKTREEIGADGAHVDLRTRCSYFYELGYKIVQL 13
           VS+S+P CFN+KTR EI AD A VDLR+RC YFYE G K+  L
Sbjct: 61  VSISVPACFNQKTRLEIQADAACVDLRSRCPYFYEFGCKLAPL 103


>ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3
           [Vitis vinifera] gi|147828134|emb|CAN64086.1|
           hypothetical protein VITISV_006937 [Vitis vinifera]
           gi|297736610|emb|CBI25481.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/108 (61%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
 Frame = -3

Query: 321 MAQYYDIDDILADEELVPAVFLEAVNGVGLFE-SNDTDRVEPRSKVELPFWLARELHMRQ 145
           MA YY+ID+I+ +EELV AVF +A NGVG+ + S +T+ VE  SKVELPFWLA EL  RQ
Sbjct: 1   MAHYYNIDEIIVEEELVSAVFQKAANGVGILDPSAETNSVEQGSKVELPFWLAHELLQRQ 60

Query: 144 AVSVSIPPCFNKKTREEIGADGAHVDLRTRCSYFYELGYKIVQLIGDK 1
           AV++ +P CFN+KTR+EI AD   VDLR+RC YFYELG K+  L+GD+
Sbjct: 61  AVTIHVPACFNQKTRKEIQADAPCVDLRSRCPYFYELGCKVAPLVGDR 108


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