BLASTX nr result

ID: Atractylodes22_contig00033723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033723
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518086.1| conserved hypothetical protein [Ricinus comm...   150   8e-35
ref|XP_002323779.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002300170.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|XP_004157719.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...   131   5e-29
ref|XP_004134376.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   131   5e-29

>ref|XP_002518086.1| conserved hypothetical protein [Ricinus communis]
           gi|223542682|gb|EEF44219.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1006

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/115 (60%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   CDDCREGVVDRR-AXXXXXXXXXXXXXXXXXXXXXIWVCLECGHFTCGGVGFPTTPQSHA 179
           C+DCREGV DRR A                     IWVCLECGHF CGGVG PTTPQSH 
Sbjct: 75  CEDCREGVADRRGAKGKGKHGKKKGSVDSKSESKAIWVCLECGHFACGGVGLPTTPQSHV 134

Query: 180 TRHAKQNRHALAVQLANPNLRWCFPCNTLIPVKTSEENGEQKDTLSDVVKVLKSR 344
            RHA+Q RH L +Q  NP+LRWCFPCNTLIPV+ +EENGE+KD L DVV ++K+R
Sbjct: 135 VRHARQTRHPLIIQWENPHLRWCFPCNTLIPVEMTEENGEKKDALLDVVNLIKTR 189


>ref|XP_002323779.1| predicted protein [Populus trichocarpa] gi|222866781|gb|EEF03912.1|
           predicted protein [Populus trichocarpa]
          Length = 910

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/117 (52%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3   CDDCREGVVDRRAXXXXXXXXXXXXXXXXXXXXX---IWVCLECGHFTCGGVGFPTTPQS 173
           C+DCREGV DR+                         IWVCLECGH  CGGVG PTT QS
Sbjct: 74  CEDCREGVGDRKGAKGRGKQAKKKGSGSVDSKSQSKAIWVCLECGHLACGGVGLPTTAQS 133

Query: 174 HATRHAKQNRHALAVQLANPNLRWCFPCNTLIPVKTSEENGEQKDTLSDVVKVLKSR 344
           HA RH+KQ+RH L  Q  NP L+WCFPCNTLIPV+ +E NGE+KD++ +VVK +K++
Sbjct: 134 HAVRHSKQSRHPLVFQWENPQLQWCFPCNTLIPVEKTEGNGEKKDSVFEVVKTIKAQ 190


>ref|XP_002300170.1| predicted protein [Populus trichocarpa] gi|222847428|gb|EEE84975.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/117 (51%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3   CDDCREGVVDRRAXXXXXXXXXXXXXXXXXXXXX---IWVCLECGHFTCGGVGFPTTPQS 173
           C+DCRE V DR+                         IWVCLECGH  CGG+G PTT QS
Sbjct: 74  CEDCREAVGDRKGAKGKGKQVKKKGSGSVDSKSESKAIWVCLECGHLACGGIGLPTTSQS 133

Query: 174 HATRHAKQNRHALAVQLANPNLRWCFPCNTLIPVKTSEENGEQKDTLSDVVKVLKSR 344
           HA RH+KQNRH L  Q  NP LRWCFPCNTLIP + + ENGE+KD + +VV ++K++
Sbjct: 134 HAVRHSKQNRHPLVFQWENPQLRWCFPCNTLIPAEKTGENGEKKDAVFEVVNMIKAQ 190


>ref|XP_004157719.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 2-like [Cucumis sativus]
          Length = 1225

 Score =  131 bits (330), Expect = 5e-29
 Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3   CDDCREGVVDRRAXXXXXXXXXXXXXXXXXXXXX---IWVCLECGHFTCGGVGFPTTPQS 173
           C+DC++   DRR                         IW+CL+CGH+ CGG+G PT  QS
Sbjct: 75  CEDCQDSSADRRGGRGKARHGKKKGGTSVDVKTDAKAIWICLQCGHYACGGIGLPTNSQS 134

Query: 174 HATRHAKQNRHALAVQLANPNLRWCFPCNTLIPVKTSEENGEQKDTLSDVVKVLKSR 344
           HA RH +Q RH + +Q  NP LRWCF CNTL+PV+ +EENGEQKD+LS+VVK+++ R
Sbjct: 135 HAVRHVRQTRHPVVIQFENPQLRWCFSCNTLLPVEKTEENGEQKDSLSNVVKLIRDR 191


>ref|XP_004134376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Cucumis
           sativus]
          Length = 980

 Score =  131 bits (330), Expect = 5e-29
 Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3   CDDCREGVVDRRAXXXXXXXXXXXXXXXXXXXXX---IWVCLECGHFTCGGVGFPTTPQS 173
           C+DC++   DRR                         IW+CL+CGH+ CGG+G PT  QS
Sbjct: 75  CEDCQDSSADRRGGRGKARHGKKKGGTSVDVKTDAKAIWICLQCGHYACGGIGLPTNSQS 134

Query: 174 HATRHAKQNRHALAVQLANPNLRWCFPCNTLIPVKTSEENGEQKDTLSDVVKVLKSR 344
           HA RH +Q RH + +Q  NP LRWCF CNTL+PV+ +EENGEQKD+LS+VVK+++ R
Sbjct: 135 HAVRHVRQTRHPVVIQFENPQLRWCFSCNTLLPVEKTEENGEQKDSLSNVVKLIRDR 191


Top