BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033720
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM55238.1| integrase [Beta vulgaris]                              168   5e-40
gb|ABH08430.1| putative integrase [Beta vulgaris]                     168   5e-40
emb|CAD40009.3| OSJNBb0052B05.12 [Oryza sativa Japonica Group]        162   3e-38
gb|AAO66559.1| putative copia-type pol polyprotein [Oryza sativa...   161   6e-38
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  159   2e-37

>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score =  168 bits (426), Expect = 5e-40
 Identities = 79/178 (44%), Positives = 115/178 (64%)
 Frame = -2

Query: 536  ESWIWHKRLSNLNFKTINNLSTRGLIIGIPNSEFSKEKLCYACEKGKQTITXXXXXXXXX 357
            +S +WHKRL + +F  +  L ++ L++G+P+ +F  +++C AC +GKQ  +         
Sbjct: 685  DSLLWHKRLGHASFSLLEKLRSKDLVLGLPSIKFHIDQVCDACARGKQVRSSFKSKTIVS 744

Query: 356  XXSLLQLLHMDLFGPMNVQSSTGKRYKLVIVDEYSRYTWVFFLRSKDETTGEIISFIKKM 177
                L+L+H+DL GPM +QS +GKRY LVIVD+YSRYTWV FL SKDET  E + F K++
Sbjct: 745  TTKPLELIHIDLCGPMRIQSRSGKRYVLVIVDDYSRYTWVIFLSSKDETYDEFLVFAKRV 804

Query: 176  EIQNDTKVKNVRNDHGTEFKKNILNSFFEDNSVSHNFLVVRTPQQNGVAE*RNHTLIE 3
            +  +  K+ ++R+DHG EF+    +    DN + HNF   RTPQQNGV E +N TL E
Sbjct: 805  QNLSGHKIMHIRSDHGKEFENYKFDDLSRDNGLDHNFSAPRTPQQNGVVERKNRTLEE 862


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score =  168 bits (426), Expect = 5e-40
 Identities = 79/178 (44%), Positives = 115/178 (64%)
 Frame = -2

Query: 536  ESWIWHKRLSNLNFKTINNLSTRGLIIGIPNSEFSKEKLCYACEKGKQTITXXXXXXXXX 357
            +S +WHKRL + +F  +  L ++ L++G+P+ +F  +++C AC +GKQ  +         
Sbjct: 685  DSLLWHKRLGHASFSLLEKLRSKDLVLGLPSIKFHIDQVCDACARGKQVRSSFKSKTIVS 744

Query: 356  XXSLLQLLHMDLFGPMNVQSSTGKRYKLVIVDEYSRYTWVFFLRSKDETTGEIISFIKKM 177
                L+L+H+DL GPM +QS +GKRY LVIVD+YSRYTWV FL SKDET  E + F K++
Sbjct: 745  TTKPLELIHIDLCGPMRIQSRSGKRYVLVIVDDYSRYTWVIFLSSKDETYDEFLVFAKRV 804

Query: 176  EIQNDTKVKNVRNDHGTEFKKNILNSFFEDNSVSHNFLVVRTPQQNGVAE*RNHTLIE 3
            +  +  K+ ++R+DHG EF+    +    DN + HNF   RTPQQNGV E +N TL E
Sbjct: 805  QNLSGHKIMHIRSDHGKEFENYKFDDLSRDNGLDHNFSAPRTPQQNGVVERKNRTLEE 862


>emb|CAD40009.3| OSJNBb0052B05.12 [Oryza sativa Japonica Group]
          Length = 1549

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/182 (41%), Positives = 111/182 (60%)
 Frame = -2

Query: 548  ASAKESWIWHKRLSNLNFKTINNLSTRGLIIGIPNSEFSKEKLCYACEKGKQTITXXXXX 369
            A +   W+WH+RL+++  + ++ L     I+G+ N +F K+++C AC+ GKQ        
Sbjct: 823  AKSNTGWLWHRRLAHVGMRNLHKLLKHDHILGLTNVQFEKDRVCSACQAGKQIGAHHPVK 882

Query: 368  XXXXXXSLLQLLHMDLFGPMNVQSSTGKRYKLVIVDEYSRYTWVFFLRSKDETTGEIISF 189
                    L+LLHMDLFGP+   S  G +Y LVIVD++SR+TWVFFL  K ET      F
Sbjct: 883  NVMTTTRPLELLHMDLFGPIAYLSIGGNKYGLVIVDDFSRFTWVFFLHDKSETQAIFKKF 942

Query: 188  IKKMEIQNDTKVKNVRNDHGTEFKKNILNSFFEDNSVSHNFLVVRTPQQNGVAE*RNHTL 9
             ++ + + D K+KN+R+D+G EFK   + SF ++  + H F    +PQQNGVAE +N TL
Sbjct: 943  ARRAQNEFDLKIKNIRSDNGKEFKNTCIESFLDEEGIKHEFSAPYSPQQNGVAERKNQTL 1002

Query: 8    IE 3
            IE
Sbjct: 1003 IE 1004


>gb|AAO66559.1| putative copia-type pol polyprotein [Oryza sativa Japonica Group]
            gi|108709148|gb|ABF96943.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 2027

 Score =  161 bits (408), Expect = 6e-38
 Identities = 74/176 (42%), Positives = 109/176 (61%)
 Frame = -2

Query: 530  WIWHKRLSNLNFKTINNLSTRGLIIGIPNSEFSKEKLCYACEKGKQTITXXXXXXXXXXX 351
            W+WH+RL+++  + ++ L     I+G+ N +F K+++C AC+ GKQ              
Sbjct: 818  WLWHRRLAHVGMRNLHKLLKHDHILGLTNVQFEKDRVCSACQAGKQIGAHHPVKNVMTTT 877

Query: 350  SLLQLLHMDLFGPMNVQSSTGKRYKLVIVDEYSRYTWVFFLRSKDETTGEIISFIKKMEI 171
              L+LLHMDLFGP+   S  G +Y LVIVD++SR+TWVFFL  K ET      F ++ + 
Sbjct: 878  RALELLHMDLFGPIAYLSIGGNKYGLVIVDDFSRFTWVFFLHDKSETQAIFKKFARRAQN 937

Query: 170  QNDTKVKNVRNDHGTEFKKNILNSFFEDNSVSHNFLVVRTPQQNGVAE*RNHTLIE 3
            + D K+KN+R+D+G EFK   + SF ++  + H F    +PQQNGVAE +N TLIE
Sbjct: 938  EFDLKIKNIRSDNGKEFKNTCIESFLDEEGIKHEFSAPYSPQQNGVAERKNRTLIE 993


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/182 (40%), Positives = 112/182 (61%)
 Frame = -2

Query: 548 ASAKESWIWHKRLSNLNFKTINNLSTRGLIIGIPNSEFSKEKLCYACEKGKQTITXXXXX 369
           A     W+WH+RL+++  K ++ L     I+G+ N  F K+++C AC+ GKQ  T     
Sbjct: 114 AKTNMGWLWHRRLAHVGMKNLHKLLKGEHILGLTNVHFEKDRICSACQAGKQVGTHHPHK 173

Query: 368 XXXXXXSLLQLLHMDLFGPMNVQSSTGKRYKLVIVDEYSRYTWVFFLRSKDETTGEIISF 189
                   L+LLHMDLFGP+   S  G +Y LVIVD+YSR+TWVFFL+ K +T   +  F
Sbjct: 174 NIMTTDRPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGF 233

Query: 188 IKKMEIQNDTKVKNVRNDHGTEFKKNILNSFFEDNSVSHNFLVVRTPQQNGVAE*RNHTL 9
           +++ + +   ++K +R+D+GTEFK + + SF E+  + H F    TPQQNGV E +N TL
Sbjct: 234 LRRAQNEFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSSPYTPQQNGVVERKNRTL 293

Query: 8   IE 3
           ++
Sbjct: 294 LD 295