BLASTX nr result

ID: Atractylodes22_contig00033702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033702
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   205   2e-97
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223...   201   5e-96
ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding...   187   1e-89
ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   187   1e-89
ref|NP_973689.2| SNF2 and helicase domain-containing protein [Ar...   176   4e-87

>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
            vinifera]
          Length = 876

 Score =  205 bits (522), Expect(2) = 2e-97
 Identities = 99/158 (62%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
 Frame = -1

Query: 830  KVDINSKDVLSGHNVVR-RGPSSMEFDPVLDEASYLSWVEKLKETSETCDNSAMEERNKR 654
            K ++N  D+L GH+++  R   S++FDP LDEASYL WVEK KE S++ D+  ++  N+R
Sbjct: 595  KFEVNPMDLLKGHDLIMDRSSVSVDFDPGLDEASYLVWVEKFKEASQSSDDPIIQVGNRR 654

Query: 653  SLPEEKHLKTESVRKKAEEKKLARWEAEGYESLSVKDVVCPADGNILSDSGSVNFVYGDC 474
             LPEEK LK E+ RKKAEE+KLA+WEA GY SLSVKD     D +++SDSGSV+FVYGDC
Sbjct: 655  KLPEEKLLKLEAARKKAEEEKLAKWEAHGYNSLSVKDPPSHVDVDMISDSGSVDFVYGDC 714

Query: 473  TQPSKVCPSEPSIIFSCVDNSGNWGHGGIFDALAKLSS 360
            T PSKVCPSE +IIFSC+D+SG WGHGG+FDALA+LSS
Sbjct: 715  TLPSKVCPSEATIIFSCIDDSGIWGHGGMFDALARLSS 752



 Score =  177 bits (449), Expect(2) = 2e-97
 Identities = 87/120 (72%), Positives = 102/120 (85%)
 Frame = -3

Query: 360  AIPSAYERASEFQDLHLGDLHLIEVTAGGDEENKIANARQWVALAVVQTYNPRRKVPRSS 181
            ++P AY+RASEF+DLHLGDLH I++    +E+    NA QWVALAVVQ+YNPRRKVPRS+
Sbjct: 753  SVPDAYQRASEFKDLHLGDLHFIKINEDCEEQRMDCNAPQWVALAVVQSYNPRRKVPRSN 812

Query: 180  ISIPDLEQCLSKASFSAARNFASIHMPRIGYQDGSDRSEWYSVERLLRKYAALYGIKIYV 1
            IS+PDLE CLSKASF AA+  ASIHMPRIGYQ   DRSEWY+VERLLRKYA+LYGIKI+V
Sbjct: 813  ISVPDLECCLSKASFLAAQKSASIHMPRIGYQ---DRSEWYTVERLLRKYASLYGIKIFV 869


>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
            helicase, putative [Ricinus communis]
          Length = 860

 Score =  201 bits (511), Expect(2) = 5e-96
 Identities = 97/161 (60%), Positives = 127/161 (78%), Gaps = 1/161 (0%)
 Frame = -1

Query: 839  EGGKVDINSKDVLSGHNVVRRGPSS-MEFDPVLDEASYLSWVEKLKETSETCDNSAMEER 663
            +GGK  ++  D   G +VV  G S+ + +DP LDEASYLSWVE+ KE S++  N  ++  
Sbjct: 581  DGGKYKLDQVDQKKGFDVVTGGNSAFINYDPGLDEASYLSWVERFKEASQSSGNMVLDLG 640

Query: 662  NKRSLPEEKHLKTESVRKKAEEKKLARWEAEGYESLSVKDVVCPADGNILSDSGSVNFVY 483
            ++RSLPE+KHLK E+ +KKAEEKKL +WE+ GY SLSVKD     DG++LS+SG ++FV 
Sbjct: 641  HRRSLPEDKHLKLEAAKKKAEEKKLNKWESLGYHSLSVKDPEA-VDGDVLSESGFLHFVV 699

Query: 482  GDCTQPSKVCPSEPSIIFSCVDNSGNWGHGGIFDALAKLSS 360
            GDCT+P+KVCPSEP++IFSCVDNSGNWGHGG+F+ALAKLSS
Sbjct: 700  GDCTEPAKVCPSEPTVIFSCVDNSGNWGHGGMFNALAKLSS 740



 Score =  177 bits (448), Expect(2) = 5e-96
 Identities = 84/120 (70%), Positives = 102/120 (85%)
 Frame = -3

Query: 360  AIPSAYERASEFQDLHLGDLHLIEVTAGGDEENKIANARQWVALAVVQTYNPRRKVPRSS 181
            ++P+AYERASEF DL+LGDLHLI +    + ++   ++ QWVALAVVQ+YNPRRKVPRS+
Sbjct: 741  SVPNAYERASEFGDLNLGDLHLIRINEDSETQSTEGDSPQWVALAVVQSYNPRRKVPRSN 800

Query: 180  ISIPDLEQCLSKASFSAARNFASIHMPRIGYQDGSDRSEWYSVERLLRKYAALYGIKIYV 1
            ISIPDLE  LSK SF AA+N+ASIHMPRIGY DG DRS+WY+VERLLRKYA++YGI IYV
Sbjct: 801  ISIPDLEHSLSKVSFVAAQNYASIHMPRIGYGDGLDRSQWYTVERLLRKYASIYGINIYV 860


>ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Cucumis
            sativus]
          Length = 868

 Score =  187 bits (474), Expect(2) = 1e-89
 Identities = 90/120 (75%), Positives = 105/120 (87%)
 Frame = -3

Query: 360  AIPSAYERASEFQDLHLGDLHLIEVTAGGDEENKIANARQWVALAVVQTYNPRRKVPRSS 181
            ++PSAYERASEF DLHLGDLHLI++     E++   NA QWVALAVVQ+YNPRRKVPRS 
Sbjct: 742  SVPSAYERASEFGDLHLGDLHLIKLGIISKEQSTSDNAPQWVALAVVQSYNPRRKVPRSK 801

Query: 180  ISIPDLEQCLSKASFSAARNFASIHMPRIGYQDGSDRSEWYSVERLLRKYAALYGIKIYV 1
            IS+PDLE C+SKAS SAA++ ASIHMPRIGYQDGSDRSEWY+VERLLRKYA++Y +KIYV
Sbjct: 802  ISLPDLENCISKASSSAAKHSASIHMPRIGYQDGSDRSEWYTVERLLRKYASIYNVKIYV 861



 Score =  169 bits (429), Expect(2) = 1e-89
 Identities = 82/140 (58%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
 Frame = -1

Query: 776  GPSSMEFDPVLDEASYLSWVEKLKETSETCDNSAMEERNKRSLPEEKHLKTESVRKKAEE 597
            G +S+ FDP LDE SY SW+EK KE +    N   E  ++++L  +K LK ++ +KKAEE
Sbjct: 602  GTTSLNFDPGLDEVSYRSWIEKFKEATPGA-NQIKELEDRKTLSRDKSLKLQAAKKKAEE 660

Query: 596  KKLARWEAEGYESLSVKDVVCPADGNILSDSGSVNFVYGDCTQPSKV--CPSEPSIIFSC 423
            KKL++WEA GY SLSV+D + P DG+++SD+GSV FVYGDCT PS    C SEP+IIFSC
Sbjct: 661  KKLSKWEALGYHSLSVEDPILPNDGDLISDAGSVYFVYGDCTHPSATVNCISEPTIIFSC 720

Query: 422  VDNSGNWGHGGIFDALAKLS 363
            VD+SG+WGHGG+F ALAKLS
Sbjct: 721  VDDSGSWGHGGMFGALAKLS 740


>ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 1-like [Cucumis sativus]
          Length = 867

 Score =  187 bits (474), Expect(2) = 1e-89
 Identities = 90/120 (75%), Positives = 105/120 (87%)
 Frame = -3

Query: 360  AIPSAYERASEFQDLHLGDLHLIEVTAGGDEENKIANARQWVALAVVQTYNPRRKVPRSS 181
            ++PSAYERASEF DLHLGDLHLI++     E++   NA QWVALAVVQ+YNPRRKVPRS 
Sbjct: 741  SVPSAYERASEFGDLHLGDLHLIKLGIISKEQSTSDNAPQWVALAVVQSYNPRRKVPRSK 800

Query: 180  ISIPDLEQCLSKASFSAARNFASIHMPRIGYQDGSDRSEWYSVERLLRKYAALYGIKIYV 1
            IS+PDLE C+SKAS SAA++ ASIHMPRIGYQDGSDRSEWY+VERLLRKYA++Y +KIYV
Sbjct: 801  ISLPDLENCISKASSSAAKHSASIHMPRIGYQDGSDRSEWYTVERLLRKYASIYNVKIYV 860



 Score =  169 bits (429), Expect(2) = 1e-89
 Identities = 82/140 (58%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
 Frame = -1

Query: 776  GPSSMEFDPVLDEASYLSWVEKLKETSETCDNSAMEERNKRSLPEEKHLKTESVRKKAEE 597
            G +S+ FDP LDE SY SW+EK KE +    N   E  ++++L  +K LK ++ +KKAEE
Sbjct: 601  GTTSLNFDPGLDEVSYRSWIEKFKEATPGA-NQIKELEDRKTLSRDKSLKLQAAKKKAEE 659

Query: 596  KKLARWEAEGYESLSVKDVVCPADGNILSDSGSVNFVYGDCTQPSKV--CPSEPSIIFSC 423
            KKL++WEA GY SLSV+D + P DG+++SD+GSV FVYGDCT PS    C SEP+IIFSC
Sbjct: 660  KKLSKWEALGYHSLSVEDPILPNDGDLISDAGSVYFVYGDCTHPSATVNCISEPTIIFSC 719

Query: 422  VDNSGNWGHGGIFDALAKLS 363
            VD+SG+WGHGG+F ALAKLS
Sbjct: 720  VDDSGSWGHGGMFGALAKLS 739


>ref|NP_973689.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
            gi|330255399|gb|AEC10493.1| SNF2 and helicase
            domain-containing protein [Arabidopsis thaliana]
          Length = 877

 Score =  176 bits (445), Expect(2) = 4e-87
 Identities = 81/119 (68%), Positives = 103/119 (86%)
 Frame = -3

Query: 357  IPSAYERASEFQDLHLGDLHLIEVTAGGDEENKIANARQWVALAVVQTYNPRRKVPRSSI 178
            +P+AY RASEF+DLHLGDLHLI++    D++N  A+   WVA+AV Q+YN RRKVPRSSI
Sbjct: 752  VPTAYHRASEFKDLHLGDLHLIKIDDNDDQQNTQASKPLWVAVAVTQSYNSRRKVPRSSI 811

Query: 177  SIPDLEQCLSKASFSAARNFASIHMPRIGYQDGSDRSEWYSVERLLRKYAALYGIKIYV 1
            SIPDLE CL+KASFSA++  AS+HMPRIGYQDGSDRS+WY+VERLLRKY++++ +KI+V
Sbjct: 812  SIPDLESCLAKASFSASQKSASLHMPRIGYQDGSDRSQWYTVERLLRKYSSIFTVKIFV 870



 Score =  172 bits (437), Expect(2) = 4e-87
 Identities = 91/163 (55%), Positives = 117/163 (71%), Gaps = 1/163 (0%)
 Frame = -1

Query: 845  EAEGGKVDINSKDVLSGHNVVRRGPSSMEFDPVLDEASYLSWVEKLKETSETC-DNSAME 669
            + E  + +INS D L G+       SS   D  LDEASYLSWVEKLKE + +  D   +E
Sbjct: 595  DKEERRFEINSSDTLLGNT------SSASLDSELDEASYLSWVEKLKEAARSSKDEKIIE 648

Query: 668  ERNKRSLPEEKHLKTESVRKKAEEKKLARWEAEGYESLSVKDVVCPADGNILSDSGSVNF 489
              N+++L EE++L+ E+ RKKAEEKKLA W A GY+SLSV++ + P D +  SD+GSVNF
Sbjct: 649  LGNRKNLSEERNLRIEAARKKAEEKKLATWGAHGYQSLSVEEPILPDDVDSSSDAGSVNF 708

Query: 488  VYGDCTQPSKVCPSEPSIIFSCVDNSGNWGHGGIFDALAKLSS 360
            V+GDCT PS V   EP+IIFSCVD+SGNWG GG+FDAL+KLS+
Sbjct: 709  VFGDCTNPSTV-SHEPAIIFSCVDDSGNWGRGGMFDALSKLSN 750


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