BLASTX nr result

ID: Atractylodes22_contig00033694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033694
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topor...   105   3e-21
emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]   105   3e-21
emb|CBI26097.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topor...    98   8e-19

>ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Vitis vinifera]
          Length = 294

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
 Frame = -3

Query: 364 ANRQRQRQRFLCNHLGPAIMGKSCPICLTPI--QEAALITVCLHAYCTDCIRKWSNQKRK 191
           ++ +  R +F+   + PAI GKSCPICL+ +  + AA+IT CLHAYC  CIR+WS+ KRK
Sbjct: 19  SSSRMSRGKFVKKVMAPAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRRWSDLKRK 78

Query: 190 CPLCNAHFASLFLGIDLNSRTFRTKHLSALRESPGKFNNDIGDSNGRR 47
           CPLCNAHF SLF  I L+S+TF  + L  L E  G   N  G + GRR
Sbjct: 79  CPLCNAHFDSLFYRISLSSQTFLKEKLRPLAE--GGTVNFGGGNAGRR 124


>emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]
          Length = 321

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
 Frame = -3

Query: 364 ANRQRQRQRFLCNHLGPAIMGKSCPICLTPI--QEAALITVCLHAYCTDCIRKWSNQKRK 191
           ++ +  R +F+   + PAI GKSCPICL+ +  + AA+IT CLHAYC  CIR+WS+ KRK
Sbjct: 17  SSSRMSRGKFVKKVMAPAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRRWSDLKRK 76

Query: 190 CPLCNAHFASLFLGIDLNSRTFRTKHLSALRESPGKFNNDIGDSNGRR 47
           CPLCNAHF SLF  I L+S+TF  + L  L E  G   N  G + GRR
Sbjct: 77  CPLCNAHFDSLFYRISLSSQTFLKEKLRPLAE--GGTVNFGGGNAGRR 122


>emb|CBI26097.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = -3

Query: 322 LGPAIMGKSCPICLTPI--QEAALITVCLHAYCTDCIRKWSNQKRKCPLCNAHFASLFLG 149
           + PAI GKSCPICL+ +  + AA+IT CLHAYC  CIR+WS+ KRKCPLCNAHF SLF  
Sbjct: 1   MAPAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRRWSDLKRKCPLCNAHFDSLFYR 60

Query: 148 IDLNSRTFRTKHLSALRESPGKFNNDIGDSNGRR 47
           I L+S+TF  + L  L E  G   N  G + GRR
Sbjct: 61  ISLSSQTFLKEKLRPLAE--GGTVNFGGGNAGRR 92


>ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|222871537|gb|EEF08668.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/120 (45%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
 Frame = -3

Query: 361 NRQRQRQRFLCNHLGPAIMGKSCPICLTPI------QEAALITVCLHAYCTDCIRKWSNQ 200
           ++++ +++FL   + PAI G+SCP+CL         +  A+I VCLHAYC DCIRKWS+ 
Sbjct: 12  SKRQSQEKFLSKVILPAIRGQSCPVCLKDFGGEEDYRRVAVIRVCLHAYCLDCIRKWSDI 71

Query: 199 KRKCPLCNAHFASLFLGIDLNSRTFRTKHLSALRESPGKFNNDIGDSNGRRRDFMAQRRA 20
           KRKCPLCN+ F S F  I L++R F T+ L  +RES      DI  S  R    +A RR+
Sbjct: 72  KRKCPLCNSEFNSWFCRIILSTRNFSTEKLPVVRESRRVTPLDILSSRQRAGLNVANRRS 131


>ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
           sativus]
          Length = 288

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
 Frame = -3

Query: 358 RQRQRQRFLCNHLGPAIMGKSCPICLTPIQE--AALITVCLHAYCTDCIRKWSNQKRKCP 185
           R+   + F+   + PAI G++CPICL  +++  AA++T C+HAYC  CIRKWSN KR CP
Sbjct: 12  RKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTCP 71

Query: 184 LCNAHFASLFLGIDLNSRTFRTKHLSALRESPGKFNNDIGDSNGRRRDFMAQRR 23
           LCNA F S F  I+L+S++FR + L+    S  K    +G S    R  +   R
Sbjct: 72  LCNAQFDSWFTKINLSSQSFRKERLTTSNCS-DKLKVGVGSSQIDARGILQSTR 124


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