BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033689
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW22925.1| RNA polymerase II second largest subunit [Asarum ...   158   4e-37
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...   157   8e-37
emb|CAB43079.1| RNA polymerase II [Peltanthera floribunda]            157   8e-37
emb|CAB43087.1| RNA polymerase II [Sanango racemosum]                 157   8e-37
emb|CAD89598.1| RNA polymerase II, second largest subunit [Borag...   156   2e-36

>gb|AAW22925.1| RNA polymerase II second largest subunit [Asarum caudatum]
          Length = 565

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/82 (91%), Positives = 79/82 (96%)
 Frame = -3

Query: 246 LIKCIMGKVAAHMGKEGDATPFTDVTVDSISRALHKCGYQMRGFETLYNYGHTGRRMTNM 67
           LI+CIMGKVAAHMGKEGDATPFTDVTVDSISRALHKCGYQMRGFET+YN GHTGRR+T M
Sbjct: 469 LIECIMGKVAAHMGKEGDATPFTDVTVDSISRALHKCGYQMRGFETMYN-GHTGRRLTAM 527

Query: 66  IFFGPTYYQRLKHMVDDKIHSQ 1
           IF GPTYYQRLKHMVDDKIHS+
Sbjct: 528 IFLGPTYYQRLKHMVDDKIHSR 549


>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
          Length = 1191

 Score =  157 bits (397), Expect = 8e-37
 Identities = 73/82 (89%), Positives = 80/82 (97%)
 Frame = -3

Query: 246  LIKCIMGKVAAHMGKEGDATPFTDVTVDSISRALHKCGYQMRGFETLYNYGHTGRRMTNM 67
            LI+CIMGKVAAHMGKEGDATPFTDVTVD+IS+ALHKCGYQMRGFET+YN GHTGRR+T+M
Sbjct: 986  LIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYN-GHTGRRLTSM 1044

Query: 66   IFFGPTYYQRLKHMVDDKIHSQ 1
            IF GPTYYQRLKHMVDDKIHS+
Sbjct: 1045 IFLGPTYYQRLKHMVDDKIHSR 1066


>emb|CAB43079.1| RNA polymerase II [Peltanthera floribunda]
          Length = 260

 Score =  157 bits (397), Expect = 8e-37
 Identities = 73/82 (89%), Positives = 80/82 (97%)
 Frame = -3

Query: 246 LIKCIMGKVAAHMGKEGDATPFTDVTVDSISRALHKCGYQMRGFETLYNYGHTGRRMTNM 67
           LI+CIMGKVAAHMGKEGDATPFTDVTVD+IS+ALHKCGYQMRGFET+YN GHTGRR+T+M
Sbjct: 110 LIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYN-GHTGRRLTSM 168

Query: 66  IFFGPTYYQRLKHMVDDKIHSQ 1
           IF GPTYYQRLKHMVDDKIHS+
Sbjct: 169 IFLGPTYYQRLKHMVDDKIHSR 190


>emb|CAB43087.1| RNA polymerase II [Sanango racemosum]
          Length = 259

 Score =  157 bits (397), Expect = 8e-37
 Identities = 73/82 (89%), Positives = 80/82 (97%)
 Frame = -3

Query: 246 LIKCIMGKVAAHMGKEGDATPFTDVTVDSISRALHKCGYQMRGFETLYNYGHTGRRMTNM 67
           LI+CIMGKVAAHMGKEGDATPFTDVTVD+IS+ALHKCGYQMRGFET+YN GHTGRR+T+M
Sbjct: 108 LIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYN-GHTGRRLTSM 166

Query: 66  IFFGPTYYQRLKHMVDDKIHSQ 1
           IF GPTYYQRLKHMVDDKIHS+
Sbjct: 167 IFLGPTYYQRLKHMVDDKIHSR 188


>emb|CAD89598.1| RNA polymerase II, second largest subunit [Borago officinalis]
          Length = 355

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/82 (89%), Positives = 79/82 (96%)
 Frame = -3

Query: 246 LIKCIMGKVAAHMGKEGDATPFTDVTVDSISRALHKCGYQMRGFETLYNYGHTGRRMTNM 67
           LI+CIMGKVAAHMGKEGDATPFTDVTVD+IS+ALHKCGYQMRGFET+YN GHTGRR+T M
Sbjct: 252 LIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYN-GHTGRRLTAM 310

Query: 66  IFFGPTYYQRLKHMVDDKIHSQ 1
           IF GPTYYQRLKHMVDDKIHS+
Sbjct: 311 IFLGPTYYQRLKHMVDDKIHSR 332