BLASTX nr result

ID: Atractylodes22_contig00033669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033669
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX18338.1| dicel-like 3 [Nicotiana benthamiana]                  125   8e-27
gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]    123   2e-26
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   118   9e-25
ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|...   117   2e-24
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              114   1e-23

>emb|CAX18338.1| dicel-like 3 [Nicotiana benthamiana]
          Length = 99

 Score =  125 bits (313), Expect = 8e-27
 Identities = 61/87 (70%), Positives = 70/87 (80%)
 Frame = -1

Query: 596 IPAINMKKGGPRTALYELCRKVQWPMPKFTPSEHKSSSLVEIGEGAEKRTGFNSFESHIS 417
           I  INMKKGGPR +LYELC+K+QWPMP    +E KS SLVE GEG++KR  +N+F S IS
Sbjct: 2   IGPINMKKGGPRQSLYELCKKLQWPMPSLESTERKSKSLVECGEGSDKRKVYNTFASQIS 61

Query: 416 LTIPAYGVIELTGDPRADKKSSFDSAA 336
           LTIP YG+IELTGD RADKKSS DSAA
Sbjct: 62  LTIPDYGLIELTGDERADKKSSQDSAA 88


>gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]
          Length = 596

 Score =  123 bits (309), Expect = 2e-26
 Identities = 60/87 (68%), Positives = 69/87 (79%)
 Frame = -1

Query: 596 IPAINMKKGGPRTALYELCRKVQWPMPKFTPSEHKSSSLVEIGEGAEKRTGFNSFESHIS 417
           I  INMKKGGPR +LYELC+K+QWPMP    +E KS SL E GEG++KR  +N+F S IS
Sbjct: 492 IGPINMKKGGPRQSLYELCKKLQWPMPSLESTERKSKSLTECGEGSDKRKVYNTFASQIS 551

Query: 416 LTIPAYGVIELTGDPRADKKSSFDSAA 336
           LTIP YG+IELTGD RADKKSS DSAA
Sbjct: 552 LTIPDYGLIELTGDERADKKSSQDSAA 578


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  118 bits (295), Expect = 9e-25
 Identities = 58/95 (61%), Positives = 71/95 (74%), Gaps = 3/95 (3%)
 Frame = -1

Query: 611  NPKVEIPAI---NMKKGGPRTALYELCRKVQWPMPKFTPSEHKSSSLVEIGEGAEKRTGF 441
            +P VE P I   N+KKGGPR+ L+ELC+K+QWPMP F   E+KS   +EIGEG EKR GF
Sbjct: 1527 DPNVETPVIGPINLKKGGPRSTLFELCKKLQWPMPTFNTVENKSRVQIEIGEGLEKRKGF 1586

Query: 440  NSFESHISLTIPAYGVIELTGDPRADKKSSFDSAA 336
            NSF S+I+L IP  G +E  G+ RADKKSSFDSA+
Sbjct: 1587 NSFLSNITLQIPNAGYVECEGEARADKKSSFDSAS 1621


>ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|222865638|gb|EEF02769.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1492

 Score =  117 bits (293), Expect = 2e-24
 Identities = 54/91 (59%), Positives = 69/91 (75%)
 Frame = -1

Query: 608  PKVEIPAINMKKGGPRTALYELCRKVQWPMPKFTPSEHKSSSLVEIGEGAEKRTGFNSFE 429
            P   I +IN KKGGPRT+LY+LC+KVQW MP F  +E KS + +E GEG +KRTGFNS+ 
Sbjct: 1385 PFAVIESINKKKGGPRTSLYDLCKKVQWTMPTFDTTETKSRTAIEFGEGPDKRTGFNSYV 1444

Query: 428  SHISLTIPAYGVIELTGDPRADKKSSFDSAA 336
            S I + IP+YGV+E  G+  ADKK+S+DSAA
Sbjct: 1445 SKIIMNIPSYGVVECAGEASADKKTSYDSAA 1475


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  114 bits (286), Expect = 1e-23
 Identities = 57/94 (60%), Positives = 70/94 (74%), Gaps = 3/94 (3%)
 Frame = -1

Query: 608  PKVEIP---AINMKKGGPRTALYELCRKVQWPMPKFTPSEHKSSSLVEIGEGAEKRTGFN 438
            PK++ P   +INMKKGGPR++LYELC+++QWPMP F   E +S   +  GEG+E+R GFN
Sbjct: 1578 PKLDTPVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEGSERREGFN 1637

Query: 437  SFESHISLTIPAYGVIELTGDPRADKKSSFDSAA 336
            SF S ISL IP  GV+E  GD RADKKSS DSAA
Sbjct: 1638 SFISSISLHIPNCGVMECRGDHRADKKSSLDSAA 1671


Top