BLASTX nr result

ID: Atractylodes22_contig00033663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033663
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307793.1| cholesterol transport protein [Populus trich...   115   5e-24
emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]   109   3e-22
emb|CBI37746.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Gly...    97   1e-18
ref|XP_003519693.1| PREDICTED: niemann-Pick C1 protein-like [Gly...    96   3e-18

>ref|XP_002307793.1| cholesterol transport protein [Populus trichocarpa]
           gi|222857242|gb|EEE94789.1| cholesterol transport
           protein [Populus trichocarpa]
          Length = 1274

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/67 (77%), Positives = 60/67 (89%)
 Frame = +1

Query: 112 NAKRSDTRILLTSNAKLREKHGEDYCAMYDICGARIDGKVVNCPFGSPSVKPDDLLSAKI 291
           + +RSDTR+LLT NA  RE+H E+YCAMYDICGAR DGKV+NCP+GSPSVKPDDLLS KI
Sbjct: 12  SGERSDTRLLLTRNAVSRERHSEEYCAMYDICGAREDGKVLNCPYGSPSVKPDDLLSQKI 71

Query: 292 QSLCPSI 312
           QSLCP+I
Sbjct: 72  QSLCPTI 78


>emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/78 (61%), Positives = 62/78 (79%)
 Frame = +1

Query: 79   CFQVLLFVSIGNAKRSDTRILLTSNAKLREKHGEDYCAMYDICGARIDGKVVNCPFGSPS 258
            CF VL+F S+  A+++D++ LL  NA   E+H  +YCAMYDICG R DGKV+NCP+G+P+
Sbjct: 833  CFPVLIFASLLGAEKTDSQFLLFPNATSGERHSPEYCAMYDICGERSDGKVLNCPYGTPA 892

Query: 259  VKPDDLLSAKIQSLCPSI 312
            VKPD+ LSAKIQSLCP I
Sbjct: 893  VKPDEFLSAKIQSLCPMI 910


>emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/81 (59%), Positives = 63/81 (77%)
 Frame = +1

Query: 70   AVVCFQVLLFVSIGNAKRSDTRILLTSNAKLREKHGEDYCAMYDICGARIDGKVVNCPFG 249
            A+   QVL+F S+  A+++D++ LL  NA   E+H  +YCAMYDICG R DGKV+NCP+G
Sbjct: 816  ALSLLQVLIFASLLGAEKTDSQFLLFPNATSGERHSPEYCAMYDICGERSDGKVLNCPYG 875

Query: 250  SPSVKPDDLLSAKIQSLCPSI 312
            +P+VKPD+ LSAKIQSLCP I
Sbjct: 876  TPAVKPDEFLSAKIQSLCPMI 896


>ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1257

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 41/50 (82%), Positives = 47/50 (94%)
 Frame = +1

Query: 163 REKHGEDYCAMYDICGARIDGKVVNCPFGSPSVKPDDLLSAKIQSLCPSI 312
           +E+H EDYCAMYDICG R DGKVVNCP+GSP+VKPDDLLS+KIQSLCP+I
Sbjct: 10  KERHSEDYCAMYDICGTRSDGKVVNCPYGSPAVKPDDLLSSKIQSLCPTI 59


>ref|XP_003519693.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1268

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/84 (57%), Positives = 55/84 (65%)
 Frame = +1

Query: 61  IYMAVVCFQVLLFVSIGNAKRSDTRILLTSNAKLREKHGEDYCAMYDICGARIDGKVVNC 240
           I+      QV L  S   A + +T          R KH E+YCAMYDICG R DGK +NC
Sbjct: 4   IFSVTFLLQVFLLSSSPAASQRET---------YRAKHSEEYCAMYDICGQRSDGKALNC 54

Query: 241 PFGSPSVKPDDLLSAKIQSLCPSI 312
           P+GSPSVKPDDLLSAKIQSLCP+I
Sbjct: 55  PYGSPSVKPDDLLSAKIQSLCPTI 78


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