BLASTX nr result

ID: Atractylodes22_contig00033641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033641
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56
ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus com...   204   2e-50
ref|XP_003518432.1| PREDICTED: sister chromatid cohesion 1 prote...   183   4e-44
emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]   171   3e-40
ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 prote...   170   4e-40

>ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|222851997|gb|EEE89544.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  224 bits (571), Expect = 2e-56
 Identities = 123/249 (49%), Positives = 162/249 (65%), Gaps = 5/249 (2%)
 Frame = -3

Query: 793 SNLGEIEQPLQFSNSNTLTR-FQRSSYMAMKLDSID---VSHNVSEVDLPQDHHQADVAN 626
           +++GEIEQ L +SN+ T T  FQ+++Y  M+LD++D   V+++  E D     HQAD  N
Sbjct: 102 TDVGEIEQSLNYSNAATTTMGFQQTAYFTMRLDNVDEPFVNNDTREGDASHHLHQADADN 161

Query: 625 ITLY*PFDSYKADAGLLNQFERFDIEGDEETQVSFPCHDHTDMPSSLVPSPPLQDEAQNP 446
           ITL+  FDSY+ADA   N+FERFDIEGDEETQV+F   DH D+P++L+PSP  QDEAQ  
Sbjct: 162 ITLFERFDSYQADADAYNRFERFDIEGDEETQVNFTSADHMDIPTTLIPSPHEQDEAQRA 221

Query: 445 NEIHEQRPGNDANHQSDDDK-AQYSPLKQXXXXXXXXXXXXPLMDFVQTIIPGQMYQSWL 269
            E  +  P    N QS++ K A+    K+              +D+ QTIIPG +YQSWL
Sbjct: 222 EENQDHHPEFQVNQQSNECKGARQDQQKRRPIKRKTRRQATTTVDYEQTIIPGHVYQSWL 281

Query: 268 QNTSDIVSRRGRKRKHLHLGSMHSVKMARLMDLPPVALACGLLTNENGDIYYPLPLLKQW 89
           QN SDIVSRRGRKRK   +G M + K++ LM+LPP  L   +  N N +IYYP PLL+ W
Sbjct: 282 QNASDIVSRRGRKRK-ARMGIMSTTKISNLMELPPTVL---IDDNGNREIYYPAPLLELW 337

Query: 88  MRSTQPSHD 62
            +STQP HD
Sbjct: 338 TKSTQPPHD 346


>ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223539902|gb|EEF41480.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 613

 Score =  204 bits (520), Expect = 2e-50
 Identities = 116/261 (44%), Positives = 158/261 (60%), Gaps = 17/261 (6%)
 Frame = -3

Query: 793 SNLGEIEQPLQFSNSNTLTRFQRSSYMAMKLDSID---VSHNVSEVDLPQDHHQADVANI 623
           ++ GEIEQ + FSN+N    FQR++Y AM+LD +D   ++++  E D+ Q  HQAD  +I
Sbjct: 103 TDAGEIEQSVNFSNANAAMEFQRTAYFAMRLDDVDEPFINNDSREEDVSQQLHQADPEHI 162

Query: 622 TLY*PFDSYKADAGLLNQFERFDIEGDEETQVSFPCHDHTDMPSSLVPSPPLQDEAQNP- 446
            L+  FD Y+    + N++ERFDIE +EETQ++F   +H ++P+SL+PSPP QDEA +  
Sbjct: 163 RLFERFDLYQTHTEMYNRYERFDIE-EEETQLNFTSGEHVEIPTSLIPSPPKQDEAPSAY 221

Query: 445 -----------NEIHEQRPGN--DANHQSDDDKAQYSPLKQXXXXXXXXXXXXPLMDFVQ 305
                      N+  EQ+  +  D      +D+ +  P K+              MD+ Q
Sbjct: 222 LVQLMKSKTVKNKPVEQKNASLTDLESMMKEDQQRKGPTKKRIKRQATPA-----MDYEQ 276

Query: 304 TIIPGQMYQSWLQNTSDIVSRRGRKRKHLHLGSMHSVKMARLMDLPPVALACGLLTNENG 125
           TIIPG  YQSWLQN SDIVSRRGRKRK      M  +K A LM+LPP+ L   L  N NG
Sbjct: 277 TIIPGPTYQSWLQNASDIVSRRGRKRK-ARRDIMSKMKTANLMELPPLVLIDDLSANANG 335

Query: 124 DIYYPLPLLKQWMRSTQPSHD 62
           +IYYP PLL+ WM+STQP HD
Sbjct: 336 EIYYPAPLLELWMKSTQPPHD 356


>ref|XP_003518432.1| PREDICTED: sister chromatid cohesion 1 protein 1-like [Glycine max]
          Length = 623

 Score =  183 bits (465), Expect = 4e-44
 Identities = 113/264 (42%), Positives = 153/264 (57%), Gaps = 20/264 (7%)
 Frame = -3

Query: 793 SNLGEIEQPLQFSNSNTLTRFQRSSYMAMKLDSID---VSHNVSE-VDLPQDHHQADVAN 626
           +N+ +IEQ LQFSN+ T   FQ ++Y  M+LDS+D   +S+   E  D  +  HQ D  N
Sbjct: 120 TNVADIEQSLQFSNTGTTNGFQHNAYFTMRLDSVDEPFISNGAREDQDQSELLHQVDAEN 179

Query: 625 ITLY*PFDSYKADAG-----LLNQFERFDIEGDEETQVSFPCHDHTDMPSSLVPSPPLQD 461
           ITL+  F++++A+A      L  +FERFDIEGDEETQV+    D   +P++LVPSPP QD
Sbjct: 180 ITLFERFETFQANADPYNHLLFERFERFDIEGDEETQVNVTSADQ--IPTTLVPSPPHQD 237

Query: 460 EAQ----NPNEIHEQ-----RPGNDANHQSDDDKA--QYSPLKQXXXXXXXXXXXXPLMD 314
           E      N   + E+     RP +      +D ++  Q  P ++              MD
Sbjct: 238 EPTRAYANTGVLMEETTVPSRPNSFMTQPRNDQRSAMQQEPKRRGPNKRKRGQPSTIEMD 297

Query: 313 FVQTIIPGQMYQSWLQNTSDIVSRRGRKRKHLHLGSMHSVKMARLMDLPPVALACGLLTN 134
           + QTIIP  +YQ WLQN SDIVSRRGRK+K   +  M S K+A LM LPPV L   L T 
Sbjct: 298 YEQTIIPAHIYQHWLQNASDIVSRRGRKKKLTDV--MSSTKIANLMKLPPVVLIGDLFTA 355

Query: 133 ENGDIYYPLPLLKQWMRSTQPSHD 62
           EN +IYYP  ++  W++S QP HD
Sbjct: 356 ENDNIYYPKAIMDLWIKSIQPPHD 379


>emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]
          Length = 597

 Score =  171 bits (432), Expect = 3e-40
 Identities = 106/252 (42%), Positives = 151/252 (59%), Gaps = 12/252 (4%)
 Frame = -3

Query: 781 EIEQPLQFSNSNTLTRF--QRSSYMAMKLDSID---VSHNVSEVDLPQDHHQADVANITL 617
           EIE+ L FSN+ T       + +Y+ + LD++D   ++ N    D+ QD+HQAD  NITL
Sbjct: 102 EIERFLNFSNTATTVMGLQPQGAYICVCLDNVDETYITGNTGGEDVLQDNHQADADNITL 161

Query: 616 Y*PFDSYKADAGLLNQFERFDIEGDEETQVSFPCHDHTDMPSSLVPSPPLQDEAQN---P 446
           + PF+SY+AD  L N+ ERF+ +G  E Q++F   +   +PS+L+PSP  Q+E Q     
Sbjct: 162 WEPFNSYQADTNLNNRDERFEEDG--EIQLNFTPAEQ--IPSTLIPSPSHQNEHQKGXPA 217

Query: 445 NEIHEQRPGNDANHQSDDDK----AQYSPLKQXXXXXXXXXXXXPLMDFVQTIIPGQMYQ 278
           +EI +  P N  N Q D+ K    ++    +Q             +MD  Q IIPG +YQ
Sbjct: 218 DEIQDLHPENQVNQQPDEHKEVNQSEQDQPRQGIIRKRGRRPAAFVMDDEQIIIPGNLYQ 277

Query: 277 SWLQNTSDIVSRRGRKRKHLHLGSMHSVKMARLMDLPPVALACGLLTNENGDIYYPLPLL 98
           SWLQ+ S+IV+RRG++RK+L    M  VK+A LM+LPP  L  G+LT+  G+I YP PLL
Sbjct: 278 SWLQDPSNIVARRGKRRKNL----MPXVKIANLMELPPSTLIDGILTSGTGEIQYPAPLL 333

Query: 97  KQWMRSTQPSHD 62
           + WMRS Q  HD
Sbjct: 334 ELWMRSIQLPHD 345


>ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 protein 1-like [Vitis
           vinifera]
          Length = 608

 Score =  170 bits (431), Expect = 4e-40
 Identities = 106/252 (42%), Positives = 151/252 (59%), Gaps = 12/252 (4%)
 Frame = -3

Query: 781 EIEQPLQFSNSNTLTRF--QRSSYMAMKLDSID---VSHNVSEVDLPQDHHQADVANITL 617
           EIE+ L FSN+ T       + +Y+ + LD++D   ++ N    D+ QD+HQAD  NITL
Sbjct: 108 EIERFLNFSNTATTVMGLQPQGAYICVCLDNVDETYITGNTGGEDVLQDNHQADADNITL 167

Query: 616 Y*PFDSYKADAGLLNQFERFDIEGDEETQVSFPCHDHTDMPSSLVPSPPLQDEAQN---P 446
           + PF+SY+AD  L N+ ERF+ +G  E Q++F   +   +PS+L+PSP  Q+E Q     
Sbjct: 168 WEPFNSYQADTNLNNRDERFEEDG--EIQLNFTPAEQ--IPSTLIPSPSHQNEHQKGDPA 223

Query: 445 NEIHEQRPGNDANHQSDDDK----AQYSPLKQXXXXXXXXXXXXPLMDFVQTIIPGQMYQ 278
           +EI +  P N  N Q D+ K    ++    +Q             +MD  Q IIPG +YQ
Sbjct: 224 DEIQDLHPENQVNQQPDEHKEVNQSEQDQPRQGIIRKRGRRPAAFVMDDEQIIIPGNLYQ 283

Query: 277 SWLQNTSDIVSRRGRKRKHLHLGSMHSVKMARLMDLPPVALACGLLTNENGDIYYPLPLL 98
           SWLQ+ S+IV+RRG++RK+L    M  VK+A LM+LPP  L  G+LT+  G+I YP PLL
Sbjct: 284 SWLQDPSNIVARRGKRRKNL----MPIVKIANLMELPPSTLIDGILTSGTGEIQYPAPLL 339

Query: 97  KQWMRSTQPSHD 62
           + WMRS Q  HD
Sbjct: 340 ELWMRSIQLPHD 351


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