BLASTX nr result

ID: Atractylodes22_contig00033586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033586
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    63   2e-08

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = +3

Query: 9    QRLVKWKGRSSDDVTWVDEEVFRSQFPDFSLEDKAVVKEPGSVRSPESEAQPEVQPIVTQ 188
            Q LV W G+  ++ TW D  + RSQFP+F LEDKA++     VR+ ES        +V  
Sbjct: 1225 QVLVHWMGQKVEEATWEDTLIIRSQFPNFYLEDKAMLSGGSIVRTAES--------LVHN 1276

Query: 189  STSKPNVWRVYSRR 230
            +T  P VW+VYSRR
Sbjct: 1277 TTVGPKVWQVYSRR 1290


Top