BLASTX nr result

ID: Atractylodes22_contig00033585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033585
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    71   1e-10
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    70   1e-10
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    70   2e-10
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    61   1e-07

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355502480|gb|AES83683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/43 (69%), Positives = 40/43 (93%)
 Frame = -1

Query: 131 EYRMAVKKVELPMFDGDDPVGWITRAEIYFEVQNSPEEIKVKL 3
           E R+A KKV+LP+F+GDDPV WITRAEIYF+VQN+P++++VKL
Sbjct: 739 ESRLAGKKVKLPLFEGDDPVAWITRAEIYFDVQNTPDDMRVKL 781


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = -1

Query: 146 DDRMAEYRMAVKKVELPMFDGDDPVGWITRAEIYFEVQNSPEEIKVKL 3
           D+ + E+R++VKKVEL MF+GDDP GWI RAE+YF VQN+  EIKV L
Sbjct: 71  DEALDEFRLSVKKVELLMFNGDDPAGWIARAEVYFNVQNTTPEIKVNL 118


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/48 (62%), Positives = 41/48 (85%)
 Frame = -1

Query: 146 DDRMAEYRMAVKKVELPMFDGDDPVGWITRAEIYFEVQNSPEEIKVKL 3
           D   +E R+A KKV+LP+FDGDDPV WITRAEIYF+VQ++ ++++VKL
Sbjct: 61  DSAQSESRLAGKKVKLPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKL 108


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 37/43 (86%)
 Frame = -1

Query: 131 EYRMAVKKVELPMFDGDDPVGWITRAEIYFEVQNSPEEIKVKL 3
           E R++ KKV+LP+F+GDD V WITR EIYF+VQN+ ++++VKL
Sbjct: 49  ESRLSGKKVKLPLFEGDDLVAWITRVEIYFDVQNTTDKMRVKL 91


Top