BLASTX nr result

ID: Atractylodes22_contig00033541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033541
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-co...    60   1e-07
ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca...    60   1e-07
emb|CBI21155.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu...    60   1e-07
ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Cucumis sativus] gi|449493301|ref|XP_004159248.1|
           PREDICTED: U2 snRNP-associated SURP motif-containing
           protein-like [Cucumis sativus]
          Length = 961

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/48 (64%), Positives = 31/48 (64%)
 Frame = +3

Query: 84  MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAP 227
           MSSFSITRKKTPFQKH                 LYAEFVESFQGDNAP
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKREEDETARLYAEFVESFQGDNAP 48


>ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula]
           gi|355522973|gb|AET03427.1| U2-associated protein SR140
           [Medicago truncatula]
          Length = 1139

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/48 (64%), Positives = 31/48 (64%)
 Frame = +3

Query: 84  MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAP 227
           MSSFSITRKKTPFQKH                 LYAEFVESFQGDNAP
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAP 48


>emb|CBI21155.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/48 (64%), Positives = 31/48 (64%)
 Frame = +3

Query: 84  MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAP 227
           MSSFSITRKKTPFQKH                 LYAEFVESFQGDNAP
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAP 48


>ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
           gi|223545356|gb|EEF46861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 979

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/48 (64%), Positives = 31/48 (64%)
 Frame = +3

Query: 84  MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAP 227
           MSSFSITRKKTPFQKH                 LYAEFVESFQGDNAP
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKREDDETARLYAEFVESFQGDNAP 48


>ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|222865775|gb|EEF02906.1|
           predicted protein [Populus trichocarpa]
          Length = 955

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/48 (64%), Positives = 31/48 (64%)
 Frame = +3

Query: 84  MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAP 227
           MSSFSITRKKTPFQKH                 LYAEFVESFQGDNAP
Sbjct: 1   MSSFSITRKKTPFQKHREEEEARKKRAEDETARLYAEFVESFQGDNAP 48


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