BLASTX nr result

ID: Atractylodes22_contig00033482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033482
         (195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543688.1| PREDICTED: topless-related protein 1-like [G...    88   8e-16
gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]                     87   1e-15
ref|XP_002517701.1| WD-repeat protein, putative [Ricinus communi...    85   7e-15
ref|XP_002327405.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_004165893.1| PREDICTED: LOW QUALITY PROTEIN: protein TOPL...    83   3e-14

>ref|XP_003543688.1| PREDICTED: topless-related protein 1-like [Glycine max]
          Length = 1132

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/64 (65%), Positives = 44/64 (68%)
 Frame = +3

Query: 3   PANNPLPGPLPKAGGFPPLGAHXXXXXXXXXXXXXLAGWMSNPPAVSHSSVSGSAIGLGG 182
           PANNPL G LPKAGGFPPLGAH             LAGWMSNP  V+H +VSG AIGLG 
Sbjct: 215 PANNPLLGSLPKAGGFPPLGAHGPFQPTPAPVPTPLAGWMSNPTTVAHPAVSGGAIGLGA 274

Query: 183 PSIP 194
           PSIP
Sbjct: 275 PSIP 278


>gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]
          Length = 1127

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/64 (65%), Positives = 44/64 (68%)
 Frame = +3

Query: 3   PANNPLPGPLPKAGGFPPLGAHXXXXXXXXXXXXXLAGWMSNPPAVSHSSVSGSAIGLGG 182
           PANNPL G LPKAG FPPLGAH             LAGWMSNPP V+H +VSG AIGLG 
Sbjct: 207 PANNPLLGSLPKAGVFPPLGAHGPFQPTPAPVPTPLAGWMSNPPTVTHPAVSGGAIGLGS 266

Query: 183 PSIP 194
           PSIP
Sbjct: 267 PSIP 270


>ref|XP_002517701.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543333|gb|EEF44865.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 1115

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/65 (66%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   PANNPLPGPLPKAGGFPPLGAHXXXXXXXXXXXXXLAGWMSNPPAVSHSSVS-GSAIGLG 179
           PANNPL G LPKAGGFPPLGAH             LAGWMSNP AV+H +VS G AIGLG
Sbjct: 197 PANNPLLGSLPKAGGFPPLGAHGPFQPTPAPVPAPLAGWMSNPSAVTHPAVSGGGAIGLG 256

Query: 180 GPSIP 194
            PSIP
Sbjct: 257 APSIP 261


>ref|XP_002327405.1| predicted protein [Populus trichocarpa] gi|222835959|gb|EEE74380.1|
           predicted protein [Populus trichocarpa]
          Length = 1172

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/64 (65%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   PANNPLPGPLPKAGGFPPLGAHXXXXXXXXXXXXXLAGWMSNPPAVSHSSVS-GSAIGLG 179
           PANNPL G LPKAGGFPPLGAH             LAGWMSNPP V+H +VS G AIGLG
Sbjct: 215 PANNPLLGSLPKAGGFPPLGAHGPFQPTPAPVPAPLAGWMSNPPTVTHPAVSGGGAIGLG 274

Query: 180 GPSI 191
            PSI
Sbjct: 275 APSI 278


>ref|XP_004165893.1| PREDICTED: LOW QUALITY PROTEIN: protein TOPLESS-like [Cucumis
           sativus]
          Length = 1139

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/65 (64%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   PANNPLPGPLPKAGGFPPLGAHXXXXXXXXXXXXXLAGWMSNPPAVSHSSVS-GSAIGLG 179
           PANNPL G LPK GGFPPLGAH             LAGWMSNP AV+H +VS G AIGLG
Sbjct: 215 PANNPLLGSLPKPGGFPPLGAHGPFQPTAAPVPAPLAGWMSNPSAVTHPAVSGGGAIGLG 274

Query: 180 GPSIP 194
            PSIP
Sbjct: 275 APSIP 279


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