BLASTX nr result

ID: Atractylodes22_contig00033473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033473
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20169.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250...    62   6e-08
ref|XP_002331717.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
gb|AEL99234.1| DNA-directed DNA polymerase, partial [Silene lati...    59   5e-07
gb|AEL99233.1| DNA-directed DNA polymerase, partial [Silene lati...    58   9e-07

>emb|CBI20169.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/79 (46%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   TEVVWEDGEKETRPDDSRKDKGDNTTXXXXXXXXXXXXXXXXXXIGNASSHATGKAGNKK 180
           TEVVWE GE ET+  DS + K    +                     A S+ TGKAG+KK
Sbjct: 400 TEVVWE-GEAETKKADSNETKKSENSIVTNAANRAPPAKKSPAVGNTAPSNVTGKAGSKK 458

Query: 181 A-STKDPKQGNIMSFFKKV 234
           A ++KDPKQGNIMSFFK+V
Sbjct: 459 AGNSKDPKQGNIMSFFKRV 477


>ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250468 [Vitis vinifera]
          Length = 524

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/79 (46%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   TEVVWEDGEKETRPDDSRKDKGDNTTXXXXXXXXXXXXXXXXXXIGNASSHATGKAGNKK 180
           TEVVWE GE ET+  DS + K    +                     A S+ TGKAG+KK
Sbjct: 447 TEVVWE-GEAETKKADSNETKKSENSIVTNAANRAPPAKKSPAVGNTAPSNVTGKAGSKK 505

Query: 181 A-STKDPKQGNIMSFFKKV 234
           A ++KDPKQGNIMSFFK+V
Sbjct: 506 AGNSKDPKQGNIMSFFKRV 524


>ref|XP_002331717.1| predicted protein [Populus trichocarpa] gi|222874323|gb|EEF11454.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/80 (43%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
 Frame = +1

Query: 1   TEVVWEDGEKETRPDDSR--KDKGDNTTXXXXXXXXXXXXXXXXXXIGNASSHATGKAGN 174
           TEVVWE  E ET+  +S+  K K +NT                      A S+   KAGN
Sbjct: 429 TEVVWEGEETETKKVESQDSKKKAENTAVTNTVNNRAPLTKKSPAAGNGAPSNPGSKAGN 488

Query: 175 KKASTKDPKQGNIMSFFKKV 234
           KK   KDPKQGNI+SFFK+V
Sbjct: 489 KKGGNKDPKQGNILSFFKRV 508


>gb|AEL99234.1| DNA-directed DNA polymerase, partial [Silene latifolia]
          Length = 162

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/83 (43%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
 Frame = +1

Query: 1   TEVVWEDGEKETRPDDSRKDKGDNTTXXXXXXXXXXXXXXXXXX----IGNAS-SHATGK 165
           TEVVWE  E++  P ++ K+    T                        GN + +HA GK
Sbjct: 80  TEVVWEGKEEDMNPSNAGKNSNSQTVKTEDNAVVAPVQRAATIKKSPATGNTTPAHAAGK 139

Query: 166 AGNKK-ASTKDPKQGNIMSFFKK 231
           AG KK A+TKDPKQGNIMSFFKK
Sbjct: 140 AGGKKGANTKDPKQGNIMSFFKK 162


>gb|AEL99233.1| DNA-directed DNA polymerase, partial [Silene latifolia]
          Length = 162

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
 Frame = +1

Query: 1   TEVVWEDGEKETRPDDSRKDKGDNTTXXXXXXXXXXXXXXXXXXIGNAS-----SHATGK 165
           TEVVWE  E++  P ++ K+    T                      A+     +HA GK
Sbjct: 80  TEVVWEGKEEDMNPSNAGKNSNGQTVKTEDNAVVAPVQRAATIKKSPATGNTVPAHAAGK 139

Query: 166 AGNKK-ASTKDPKQGNIMSFFKK 231
           AG KK A+TKDPKQGNIMSFFKK
Sbjct: 140 AGGKKGANTKDPKQGNIMSFFKK 162


Top