BLASTX nr result

ID: Atractylodes22_contig00033384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033384
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...    62   5e-08
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    62   6e-08
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...    60   2e-07
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    60   2e-07
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    60   2e-07

>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 44/107 (41%), Positives = 59/107 (55%)
 Frame = -1

Query: 324 EGIETIGRYCPMLKTLKVNRVPPGFHLLHSWTVLEYFLDRHVIAIAIGXXXXXXXXXXLI 145
           E +  IGR CP LKTLK+NR P    ++ S +  +   D    A AI           L+
Sbjct: 318 ESLRDIGRSCPNLKTLKLNRAP---EIMFSNSGFD---DN---AKAIAESMPELRHLQLL 368

Query: 144 GNNMCNDGLEAILNGCRYLKSLNLRQCNCIDPKGEPGLWNRCLEQIK 4
           GN + N GL AIL+GC +L+ L+LRQC  I+  G+  L  RC E+IK
Sbjct: 369 GNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGD--LKKRCFERIK 413


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
 Frame = -1

Query: 315 ETIGRYCPMLKTLKVNRVPPGF---HLLHSWTVLEYFLDRHVIAIAIGXXXXXXXXXXLI 145
           E IGR CP LKTLK N    G+   H+ +     + + D    AIA            LI
Sbjct: 163 EPIGRRCPRLKTLKFNS--QGYRHPHIQYDDDDEDAYDDNEAFAIA--KYMPGLRHLQLI 218

Query: 144 GNNMCNDGLEAILNGCRYLKSLNLRQCNCIDPKGEPGLWNRCLEQIK 4
           GN M NDGL A+L+GC +L+SL++R+C  ++  G  G   RC EQIK
Sbjct: 219 GNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVGTLG--KRCKEQIK 263


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 42/105 (40%), Positives = 54/105 (51%)
 Frame = -1

Query: 318 IETIGRYCPMLKTLKVNRVPPGFHLLHSWTVLEYFLDRHVIAIAIGXXXXXXXXXXLIGN 139
           +E IG+ CP LKTLK N    G+   H        ++    A AI           L GN
Sbjct: 152 LEAIGQCCPHLKTLKFNM--EGYRRPH--------IECDEEAFAIAETMPGLHHLQLFGN 201

Query: 138 NMCNDGLEAILNGCRYLKSLNLRQCNCIDPKGEPGLWNRCLEQIK 4
            + N+GL AIL+GC  L+SL+LRQC  ++  G  G   RC EQIK
Sbjct: 202 KLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLG--KRCAEQIK 244


>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
 Frame = -1

Query: 324 EGIETIGRYCPMLKTLKVNRVP-PGFHLLHSWTVLEYFLDRHVIAIAIGXXXXXXXXXXL 148
           E ++ +G+ CP LKTLK+N  P P F+        + F +   +AIA            L
Sbjct: 484 ESLKVVGQSCPNLKTLKLNSEPDPKFND-------DEFNNEEALAIA--ESMPELRHLQL 534

Query: 147 IGNNMCNDGLEAILNGCRYLKSLNLRQCNCIDPKGEPGLWNRCLEQIK 4
            GN + N GL AIL+GC +L+ L+LR+C+ +D  G+  L  RC+E+IK
Sbjct: 535 FGNILTNVGLNAILDGCPHLEHLDLRKCSNVDLTGD--LEKRCVERIK 580


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 43/105 (40%), Positives = 53/105 (50%)
 Frame = -1

Query: 318 IETIGRYCPMLKTLKVNRVPPGFHLLHSWTVLEYFLDRHVIAIAIGXXXXXXXXXXLIGN 139
           +E IGR CP LKT K N    GF           F D    A +I           L+GN
Sbjct: 164 LEAIGRCCPQLKTFKFNI--EGFRRPRM-----EFDDE---AFSIAKTMPGLRHLMLVGN 213

Query: 138 NMCNDGLEAILNGCRYLKSLNLRQCNCIDPKGEPGLWNRCLEQIK 4
            M  DGL AIL+GC +L+SL++RQC  +  +G  G   RC EQIK
Sbjct: 214 KMSKDGLRAILDGCPHLESLDIRQCFNLSLRGSLG--KRCREQIK 256


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