BLASTX nr result

ID: Atractylodes22_contig00033366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033366
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301802.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002532735.1| hypothetical protein RCOM_1749890 [Ricinus c...    59   3e-07
ref|XP_002265382.2| PREDICTED: uncharacterized protein LOC100259...    57   2e-06

>ref|XP_002301802.1| predicted protein [Populus trichocarpa] gi|222843528|gb|EEE81075.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/53 (52%), Positives = 35/53 (66%)
 Frame = -1

Query: 356 SPSYDFKKKPNFRLLILHDLFFLSSIVVSYPLYSSYFIFFSPYLIKLISLISP 198
           SPS   KK      L+L DLF   S ++S+PLY SY +FFSPYL KL+S +SP
Sbjct: 6   SPSTTTKKTDRLLSLLLSDLFLFCSFILSHPLYFSYLVFFSPYLFKLLSFLSP 58


>ref|XP_002532735.1| hypothetical protein RCOM_1749890 [Ricinus communis]
           gi|223527512|gb|EEF29637.1| hypothetical protein
           RCOM_1749890 [Ricinus communis]
          Length = 424

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
 Frame = -1

Query: 335 KKPNFRLLILHDLFFLSSIVVSYPLYSSYFIFFSPYLIKLISLISP------XXXXXXXX 174
           KK +F  L+L DL    S ++S+PLY  YFIFFSPYL + +S +SP              
Sbjct: 12  KKTHFSSLLLSDLLLFCSFILSHPLYFFYFIFFSPYLFRFLSFLSPLFITTFLLLLVFLT 71

Query: 173 XXXXXXXXXFCPKLPQLK----LGILQTVVQELKSNFDDVSGDTDECDF---EIFKFVFD 15
                       +L + K    LG  QTVV+ L+S  ++  G+ +   F   E++K VFD
Sbjct: 72  VSPNLVHDNLSTELSESKVSFLLGTYQTVVERLRSKVEE-HGNPELNQFEELEVYKIVFD 130


>ref|XP_002265382.2| PREDICTED: uncharacterized protein LOC100259312 [Vitis vinifera]
          Length = 398

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
 Frame = -1

Query: 350 SYDFKKKPNFRL-LILHDLFFLSSIVVSYPLYSSYFIFFSPYLIKLISLISP 198
           S+    KP+F + L+L DL  L S ++S+PLY  YF+FFSPY+ KL+S +SP
Sbjct: 5   SFSNANKPHFSISLLLSDLMLLFSSIISHPLYFLYFVFFSPYIFKLLSFLSP 56


Top