BLASTX nr result

ID: Atractylodes22_contig00033355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033355
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-li...    52   9e-10
emb|CBI30066.3| unnamed protein product [Vitis vinifera]               52   9e-10
emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]    51   2e-09
ref|XP_002876401.1| hypothetical protein ARALYDRAFT_324229 [Arab...    49   2e-07
emb|CAB68125.1| putative protein [Arabidopsis thaliana]                50   2e-07

>ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 417

 Score = 52.4 bits (124), Expect(2) = 9e-10
 Identities = 32/59 (54%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
 Frame = +2

Query: 161 G*EARLVEKKYLLKTRGIKSIIIELE*EYAYGYLFGERGAHRMITSHPES--LSEVSSA 331
           G + R+VEK Y  K  GIKS  IE E EY YGYL GERG H MI S  +   L E  SA
Sbjct: 208 GYKGRVVEK-YASKNGGIKSATIEFESEYGYGYLSGERGVHHMIRSSDDESILHETGSA 265



 Score = 35.4 bits (80), Expect(2) = 9e-10
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +3

Query: 120 QIWAEQLVGMYTKSAEKQG 176
           +IWAEQL+ MYTK AEKQG
Sbjct: 190 EIWAEQLLSMYTKWAEKQG 208


>emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score = 52.4 bits (124), Expect(2) = 9e-10
 Identities = 32/59 (54%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
 Frame = +2

Query: 161 G*EARLVEKKYLLKTRGIKSIIIELE*EYAYGYLFGERGAHRMITSHPES--LSEVSSA 331
           G + R+VEK Y  K  GIKS  IE E EY YGYL GERG H MI S  +   L E  SA
Sbjct: 205 GYKGRVVEK-YASKNGGIKSATIEFESEYGYGYLSGERGVHHMIRSSDDESILHETGSA 262



 Score = 35.4 bits (80), Expect(2) = 9e-10
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +3

Query: 120 QIWAEQLVGMYTKSAEKQG 176
           +IWAEQL+ MYTK AEKQG
Sbjct: 187 EIWAEQLLSMYTKWAEKQG 205


>emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score = 51.2 bits (121), Expect(2) = 2e-09
 Identities = 28/46 (60%), Positives = 30/46 (65%)
 Frame = +2

Query: 161 G*EARLVEKKYLLKTRGIKSIIIELE*EYAYGYLFGERGAHRMITS 298
           G + R+VEK Y  K  GIKS  IE E EY YGYL GERG H MI S
Sbjct: 240 GYKGRVVEK-YASKNGGIKSATIEFESEYGYGYLSGERGVHHMIRS 284



 Score = 35.4 bits (80), Expect(2) = 2e-09
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +3

Query: 120 QIWAEQLVGMYTKSAEKQG 176
           +IWAEQL+ MYTK AEKQG
Sbjct: 222 EIWAEQLLSMYTKWAEKQG 240


>ref|XP_002876401.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp.
           lyrata] gi|297322239|gb|EFH52660.1| hypothetical protein
           ARALYDRAFT_324229 [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score = 49.3 bits (116), Expect(2) = 2e-07
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = +2

Query: 155 EIG*EARLVEK-KYLLKTRGIKSIIIELE*EYAYGYLFGERGAHRMITSHPES 310
           ++G  AR+ EK  +L    G+ S  IE E ++AYGYL GERG HR+I S   S
Sbjct: 204 KLGQNARVAEKCSFLSNKSGVNSATIEFEFDFAYGYLLGERGVHRLIISSTSS 256



 Score = 30.8 bits (68), Expect(2) = 2e-07
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 117 IQIWAEQLVGMYTKSAEKQG 176
           +QIW EQ+V MY K AEK G
Sbjct: 187 LQIWTEQVVSMYIKWAEKLG 206


>emb|CAB68125.1| putative protein [Arabidopsis thaliana]
          Length = 409

 Score = 50.1 bits (118), Expect(2) = 2e-07
 Identities = 26/48 (54%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +2

Query: 158 IG*EARLVEKKYLLKTR-GIKSIIIELE*EYAYGYLFGERGAHRMITS 298
           +G  AR+ EK  LL  + G+ S  IE E E+AYGYL GERG HR+I S
Sbjct: 205 LGQNARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLIIS 252



 Score = 29.6 bits (65), Expect(2) = 2e-07
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 117 IQIWAEQLVGMYTKSAEKQG 176
           +QIW EQ+V MY K AE+ G
Sbjct: 187 LQIWTEQVVSMYIKWAERLG 206


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