BLASTX nr result

ID: Atractylodes22_contig00033326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033326
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 194   7e-55
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 185   1e-51
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              172   2e-47
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   169   2e-45
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   169   3e-45

>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  194 bits (493), Expect(2) = 7e-55
 Identities = 97/164 (59%), Positives = 121/164 (73%), Gaps = 3/164 (1%)
 Frame = -1

Query: 661  KEFYALIRAVDH*SHYLKPKKFTLYSDHEALKYLSR*LKLNTRHAKWVEFLQSYSFVIKH 482
            KEFYA+IRA+ H +HYLKPK F L+SDHEALKY++   KLN RHAKWVEFLQS++F  K+
Sbjct: 952  KEFYAIIRALMHWNHYLKPKPFVLHSDHEALKYINGQHKLNFRHAKWVEFLQSFTFSSKY 1011

Query: 481  KSGSTNMVVDALSRRYTLLSVLDFRVLGFSFLKELYARDPDFAS--ILQGSPN-NSSDPY 311
            K G  N+V DALSRR++LLSV+  RVLGF F+KELY  DPDF+   I Q   + N    Y
Sbjct: 1012 KEGKKNVVADALSRRHSLLSVMSNRVLGFEFMKELYKEDPDFSEEWITQTEGHKNQGSKY 1071

Query: 310  TETDGFLFRNGKMCIPRGLARDLIIREVHGGGLAGHYGNQQDAE 179
               +GFLF+  K+C+PRG  RDL+IREVH GG+ GH+G Q+  E
Sbjct: 1072 LLQEGFLFQGNKLCVPRGSYRDLLIREVHSGGMGGHFGVQKTLE 1115



 Score = 45.8 bits (107), Expect(2) = 7e-55
 Identities = 22/47 (46%), Positives = 29/47 (61%)
 Frame = -2

Query: 198  GINKTLKMLAKQFY*PCTKKDVQTLITRYPTCHAAKSTFHLGLYTPL 58
            G+ KTL++L  QFY P    DVQ ++ R   C  +KS+F  G YTPL
Sbjct: 1109 GVQKTLEILQDQFYWPRMMGDVQIILRRCSKCQLSKSSFQPGPYTPL 1155


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  185 bits (470), Expect(2) = 1e-51
 Identities = 90/161 (55%), Positives = 116/161 (72%), Gaps = 3/161 (1%)
 Frame = -1

Query: 661  KEFYALIRAVDH*SHYLKPKKFTLYSDHEALKYLSR*LKLNTRHAKWVEFLQSYSFVIKH 482
            KEFYA++RA++H SHYLKP+ F L+SDHEALKY++   KLN RHAKWVEFLQS++F  K+
Sbjct: 940  KEFYAIVRALNHWSHYLKPRPFVLHSDHEALKYINGQHKLNHRHAKWVEFLQSFNFSSKY 999

Query: 481  KSGSTNMVVDALSRRYTLLSVLDFRVLGFSFLKELYARDPDFA---SILQGSPNNSSDPY 311
              G  N+V DALSRR+ +LS ++ RVLGF ++KELY  DPDF     +LQ         Y
Sbjct: 1000 IEGKDNIVADALSRRFIMLSFMEQRVLGFEYMKELYVEDPDFKGEWELLQSGQIKLKSKY 1059

Query: 310  TETDGFLFRNGKMCIPRGLARDLIIREVHGGGLAGHYGNQQ 188
               +GFLF   K+C+PRG  R+L+IREVH  GLAGH+G Q+
Sbjct: 1060 LVQNGFLFFGNKLCVPRGPYRNLLIREVHSNGLAGHFGIQK 1100



 Score = 43.9 bits (102), Expect(2) = 1e-51
 Identities = 23/47 (48%), Positives = 27/47 (57%)
 Frame = -2

Query: 198  GINKTLKMLAKQFY*PCTKKDVQTLITRYPTCHAAKSTFHLGLYTPL 58
            GI KT  +L +QFY P    DVQ +I R   C  +KS F  G YTPL
Sbjct: 1097 GIQKTYDILQEQFYWPKMLGDVQDVIKRCAPCQQSKSYFQTGPYTPL 1143


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  172 bits (436), Expect(2) = 2e-47
 Identities = 81/155 (52%), Positives = 106/155 (68%)
 Frame = -1

Query: 661  KEFYALIRAVDH*SHYLKPKKFTLYSDHEALKYLSR*LKLNTRHAKWVEFLQSYSFVIKH 482
            KE YAL+RA+    HYL PK+F +++DHE+LK+L    KLN RHA+WVEF++++ +VIK+
Sbjct: 1247 KELYALVRALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKY 1306

Query: 481  KSGSTNMVVDALSRRYTLLSVLDFRVLGFSFLKELYARDPDFASILQGSPNNSSDPYTET 302
            K G  N+V DALSRRY LLS LD ++LGF  +K LYA D DF  I       +   Y   
Sbjct: 1307 KKGKDNVVADALSRRYVLLSSLDAKLLGFEHIKSLYANDSDFEKIYSSCEKFAFGKYYRH 1366

Query: 301  DGFLFRNGKMCIPRGLARDLIIREVHGGGLAGHYG 197
            DGFLF + ++CIP    R+L IRE HGGGL GH+G
Sbjct: 1367 DGFLFYDNRLCIPNSSLRELFIREAHGGGLMGHFG 1401



 Score = 43.1 bits (100), Expect(2) = 2e-47
 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = -2

Query: 198  GINKTLKMLAKQFY*PCTKKDVQTLITRYPTCHAAKSTFH-LGLYTPL 58
            G++KT+K++   F+ P  K+DV+ +  R PTC  AK+     GLYTPL
Sbjct: 1401 GVSKTIKVMQDHFHWPHMKRDVERICERCPTCKQAKAKSQPHGLYTPL 1448


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  169 bits (429), Expect(2) = 2e-45
 Identities = 76/156 (48%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
 Frame = -1

Query: 661  KEFYALIRAVDH*SHYLKPKKFTLYSDHEALKYLSR*LKLNTRHAKWVEFLQSYSFVIKH 482
            KE YAL+R ++   HYL PK+F ++SDHE+LK++    KLN RHAKWVEF++++ +VIKH
Sbjct: 1099 KELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKH 1158

Query: 481  KSGSTNMVVDALSRRYTLLSVLDFRVLGFSFLKELYARDPDFASILQGSPNNSS-DPYTE 305
            K G  N++ DALSRRYT+LS LDF++ G   +K+ Y  D +F  +LQ      + + +  
Sbjct: 1159 KKGKENVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDAEFKDVLQNCKEGRTWNKFVL 1218

Query: 304  TDGFLFRNGKMCIPRGLARDLIIREVHGGGLAGHYG 197
             DGF+FR  K+CIP    R L+++E HGGGL GH+G
Sbjct: 1219 NDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFG 1254



 Score = 38.9 bits (89), Expect(2) = 2e-45
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = -2

Query: 198  GINKTLKMLAKQFY*PCTKKDVQTLITRYPTCHAAKSTFH-LGLYTPL 58
            G+ KT  +LA  F+ P  ++DV+  + R  TC  AKS  +  GLY PL
Sbjct: 1254 GVKKTEDILATHFFWPKMRRDVERFVARCTTCQRAKSRLNPHGLYMPL 1301


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  169 bits (428), Expect(2) = 3e-45
 Identities = 77/156 (49%), Positives = 109/156 (69%), Gaps = 1/156 (0%)
 Frame = -1

Query: 661  KEFYALIRAVDH*SHYLKPKKFTLYSDHEALKYLSR*LKLNTRHAKWVEFLQSYSFVIKH 482
            KE +AL+R ++   HYL PK+F ++SDHE+LK++    KLN RHAKWVEF++S+ +VIKH
Sbjct: 1083 KELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKH 1142

Query: 481  KSGSTNMVVDALSRRYTLLSVLDFRVLGFSFLKELYARDPDFASILQGSPNNSS-DPYTE 305
            K G  N++ DALSRRY +LS LDF++ G   +KE YA D DF ++L       + + +  
Sbjct: 1143 KKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDDDFKNVLLNCKEGRTWNKFVL 1202

Query: 304  TDGFLFRNGKMCIPRGLARDLIIREVHGGGLAGHYG 197
            T+GF+FR  K+CIP    R L+++E HGGGL GH+G
Sbjct: 1203 TNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFG 1238



 Score = 38.9 bits (89), Expect(2) = 3e-45
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = -2

Query: 198  GINKTLKMLAKQFY*PCTKKDVQTLITRYPTCHAAKSTFH-LGLYTPL 58
            G+ KT  +LA  F+ P  ++DV+  + R  TC  AKS  +  GLY PL
Sbjct: 1238 GVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPL 1285


Top