BLASTX nr result

ID: Atractylodes22_contig00033304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033304
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   296   3e-78
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   295   5e-78
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              295   5e-78
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   277   1e-72
ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 ...   275   9e-72

>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score =  296 bits (758), Expect = 3e-78
 Identities = 154/215 (71%), Positives = 165/215 (76%), Gaps = 1/215 (0%)
 Frame = -2

Query: 646 AGSMERSHKSHRSRQSGPSAXXXXXXXXXXXD-LTEEKKQNPKAFAFNSTVKAKRLQSRA 470
           +GS E+SHK HRSRQ+GP             D  TEEKKQNPKAFAFNS+VKAKRLQSRA
Sbjct: 5   SGSKEQSHKVHRSRQAGPKKQAKSDKKKKTDDNSTEEKKQNPKAFAFNSSVKAKRLQSRA 64

Query: 469 SEKEQRRLHIPTIDRNTGEPAPYVIVVQGPPQVGKSLLIKSLVKHYTKHNIPDVRGPITI 290
            EKEQRRLH+PTIDR+ GEPAPYV++V GPPQVGKSLLIKSLVKHYTKHN+P+VRGPITI
Sbjct: 65  VEKEQRRLHVPTIDRSYGEPAPYVVLVHGPPQVGKSLLIKSLVKHYTKHNLPEVRGPITI 124

Query: 289 VSGKQRRLQFVECPNDINGMIXXXXXXXXXXXXXDGSYGFEMETFEFLNILQVHGFPKVM 110
           VSGKQRR+QFVECPNDINGMI             DGSYGFEMETFEFLNILQVHGFPKVM
Sbjct: 125 VSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVM 184

Query: 109 GVLTHXXXXXXXXXXXXXXXXXKHRFWTEIYDGAK 5
           GVLTH                 KHRFWTEIYDGAK
Sbjct: 185 GVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAK 219


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  295 bits (756), Expect = 5e-78
 Identities = 151/207 (72%), Positives = 162/207 (78%)
 Frame = -2

Query: 625 HKSHRSRQSGPSAXXXXXXXXXXXDLTEEKKQNPKAFAFNSTVKAKRLQSRASEKEQRRL 446
           H+SHRSRQSGPSA           D+++EKK NPKAFAF+S+VKAKRLQSRA+EKEQRRL
Sbjct: 13  HRSHRSRQSGPSAKKKSKSDKRKRDISDEKKHNPKAFAFSSSVKAKRLQSRATEKEQRRL 72

Query: 445 HIPTIDRNTGEPAPYVIVVQGPPQVGKSLLIKSLVKHYTKHNIPDVRGPITIVSGKQRRL 266
           HIPTIDR+TGEPAPYV+VV GPPQVGKSLLIKSLVKHYTKHN+ +VRGPITIVSGK RRL
Sbjct: 73  HIPTIDRSTGEPAPYVVVVHGPPQVGKSLLIKSLVKHYTKHNLSEVRGPITIVSGKNRRL 132

Query: 265 QFVECPNDINGMIXXXXXXXXXXXXXDGSYGFEMETFEFLNILQVHGFPKVMGVLTHXXX 86
           QFVECPNDINGMI             DGSYGFEMETFEFLNILQVHGFPKVMGVLTH   
Sbjct: 133 QFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDK 192

Query: 85  XXXXXXXXXXXXXXKHRFWTEIYDGAK 5
                         KHRFWTEIYDGAK
Sbjct: 193 FKDAKKLKKTKQRLKHRFWTEIYDGAK 219


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  295 bits (756), Expect = 5e-78
 Identities = 151/207 (72%), Positives = 162/207 (78%)
 Frame = -2

Query: 625 HKSHRSRQSGPSAXXXXXXXXXXXDLTEEKKQNPKAFAFNSTVKAKRLQSRASEKEQRRL 446
           H+SHRSRQSGPSA           D+++EKK NPKAFAF+S+VKAKRLQSRA+EKEQRRL
Sbjct: 13  HRSHRSRQSGPSAKKKSKSDKRKRDISDEKKHNPKAFAFSSSVKAKRLQSRATEKEQRRL 72

Query: 445 HIPTIDRNTGEPAPYVIVVQGPPQVGKSLLIKSLVKHYTKHNIPDVRGPITIVSGKQRRL 266
           HIPTIDR+TGEPAPYV+VV GPPQVGKSLLIKSLVKHYTKHN+ +VRGPITIVSGK RRL
Sbjct: 73  HIPTIDRSTGEPAPYVVVVHGPPQVGKSLLIKSLVKHYTKHNLSEVRGPITIVSGKNRRL 132

Query: 265 QFVECPNDINGMIXXXXXXXXXXXXXDGSYGFEMETFEFLNILQVHGFPKVMGVLTHXXX 86
           QFVECPNDINGMI             DGSYGFEMETFEFLNILQVHGFPKVMGVLTH   
Sbjct: 133 QFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDK 192

Query: 85  XXXXXXXXXXXXXXKHRFWTEIYDGAK 5
                         KHRFWTEIYDGAK
Sbjct: 193 FKDAKKLKKTKQRLKHRFWTEIYDGAK 219


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  277 bits (709), Expect = 1e-72
 Identities = 145/215 (67%), Positives = 159/215 (73%), Gaps = 5/215 (2%)
 Frame = -2

Query: 634 ERSHKSHRSRQSGPSAXXXXXXXXXXXDLTE-----EKKQNPKAFAFNSTVKAKRLQSRA 470
           ++S+K+HR+RQSG              +  +      KKQNPKAFAF+S+ KAKRLQSRA
Sbjct: 7   DQSNKAHRTRQSGAKTNKKKTKKKQKLNPDDVGGEDPKKQNPKAFAFSSSNKAKRLQSRA 66

Query: 469 SEKEQRRLHIPTIDRNTGEPAPYVIVVQGPPQVGKSLLIKSLVKHYTKHNIPDVRGPITI 290
            EKEQRRLH+P IDR+ GEPAPYV+VVQGPPQVGKSLLIKSLVKHYTKHN+PDVRGPITI
Sbjct: 67  VEKEQRRLHVPVIDRSYGEPAPYVVVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRGPITI 126

Query: 289 VSGKQRRLQFVECPNDINGMIXXXXXXXXXXXXXDGSYGFEMETFEFLNILQVHGFPKVM 110
           VSGKQRR+QFVECPNDINGMI             DGSYGFEMETFEFLNILQVHGFPKVM
Sbjct: 127 VSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVM 186

Query: 109 GVLTHXXXXXXXXXXXXXXXXXKHRFWTEIYDGAK 5
           GVLTH                 KHRFWTEIYDGAK
Sbjct: 187 GVLTHLDKFKDAKKLRKTKQRLKHRFWTEIYDGAK 221


>ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
           [Cucumis sativus]
          Length = 532

 Score =  275 bits (702), Expect = 9e-72
 Identities = 144/217 (66%), Positives = 160/217 (73%), Gaps = 2/217 (0%)
 Frame = -2

Query: 649 HAGSMERSHKSHRSRQSGPSAXXXXXXXXXXXDLTEE--KKQNPKAFAFNSTVKAKRLQS 476
           +A + ++SHK+HRSRQSGP+A           +   E  +K+NPKAFAFNS+VKAKRLQ+
Sbjct: 4   NASAEDQSHKAHRSRQSGPNAKKKSVNDKGKKEEVSENDRKRNPKAFAFNSSVKAKRLQA 63

Query: 475 RASEKEQRRLHIPTIDRNTGEPAPYVIVVQGPPQVGKSLLIKSLVKHYTKHNIPDVRGPI 296
           R+ EKEQRRLH+P IDR  GEPAPYVIVVQGPPQVGKSLLIKSLVKHYTKHN+PDVRGPI
Sbjct: 64  RSVEKEQRRLHVPVIDRCYGEPAPYVIVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRGPI 123

Query: 295 TIVSGKQRRLQFVECPNDINGMIXXXXXXXXXXXXXDGSYGFEMETFEFLNILQVHGFPK 116
           TIVSGKQRRLQFVECPN+INGMI             DG+YGFEMETFEFLNIL  HG PK
Sbjct: 124 TIVSGKQRRLQFVECPNEINGMIDAAKFADLTLLLIDGAYGFEMETFEFLNILHNHGLPK 183

Query: 115 VMGVLTHXXXXXXXXXXXXXXXXXKHRFWTEIYDGAK 5
           VMGVLTH                 KHRFWTEI  GAK
Sbjct: 184 VMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIRTGAK 220


Top